Hb_031862_040

Information

Type -
Description -
Location Contig31862: 83459-85005
Sequence    

Annotation

kegg
ID rcu:RCOM_0291950
description purine transporter, putative
nr
ID XP_002531513.1
description purine transporter, putative [Ricinus communis]
swissprot
ID Q9FZ95
description Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1
trembl
ID B9SZU4
description Purine transporter, putative OS=Ricinus communis GN=RCOM_0291950 PE=4 SV=1
Gene Ontology
ID GO:0016021
description purine permease 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33618: 82295-85024
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031862_040 0.0 - - purine transporter, putative [Ricinus communis]
2 Hb_001114_070 0.1549754954 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
3 Hb_008066_070 0.1552207455 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
4 Hb_001049_020 0.1570174588 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005433_060 0.1693833102 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Jatropha curcas]
6 Hb_001621_070 0.1697658312 - - hypothetical protein POPTR_0008s05890g [Populus trichocarpa]
7 Hb_001433_180 0.1724129093 - - hypothetical protein JCGZ_23261 [Jatropha curcas]
8 Hb_007676_020 0.1788325464 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Jatropha curcas]
9 Hb_020805_170 0.1815056395 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
10 Hb_001486_030 0.183471515 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001268_120 0.1838047519 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000796_250 0.1840227861 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
13 Hb_000140_410 0.1905144521 - - PREDICTED: uncharacterized protein At5g41620 isoform X1 [Jatropha curcas]
14 Hb_004631_210 0.1919778068 - - hypothetical protein POPTR_0007s05070g [Populus trichocarpa]
15 Hb_028811_010 0.194277276 - - PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]
16 Hb_000260_290 0.1943393398 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
17 Hb_000905_170 0.1949883827 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
18 Hb_001004_110 0.2002780512 - - conserved hypothetical protein [Ricinus communis]
19 Hb_008173_030 0.2009076455 - - PREDICTED: glutathione S-transferase T1-like [Jatropha curcas]
20 Hb_003609_020 0.2010203127 desease resistance Gene Name: Clusterin hypothetical protein CISIN_1g001897mg [Citrus sinensis]

Gene co-expression network

sample Hb_031862_040 Hb_031862_040 Hb_001114_070 Hb_001114_070 Hb_031862_040--Hb_001114_070 Hb_008066_070 Hb_008066_070 Hb_031862_040--Hb_008066_070 Hb_001049_020 Hb_001049_020 Hb_031862_040--Hb_001049_020 Hb_005433_060 Hb_005433_060 Hb_031862_040--Hb_005433_060 Hb_001621_070 Hb_001621_070 Hb_031862_040--Hb_001621_070 Hb_001433_180 Hb_001433_180 Hb_031862_040--Hb_001433_180 Hb_006573_300 Hb_006573_300 Hb_001114_070--Hb_006573_300 Hb_007676_020 Hb_007676_020 Hb_001114_070--Hb_007676_020 Hb_020805_170 Hb_020805_170 Hb_001114_070--Hb_020805_170 Hb_000853_060 Hb_000853_060 Hb_001114_070--Hb_000853_060 Hb_012098_170 Hb_012098_170 Hb_001114_070--Hb_012098_170 Hb_008066_070--Hb_020805_170 Hb_011512_130 Hb_011512_130 Hb_008066_070--Hb_011512_130 Hb_000140_410 Hb_000140_410 Hb_008066_070--Hb_000140_410 Hb_000905_170 Hb_000905_170 Hb_008066_070--Hb_000905_170 Hb_008066_070--Hb_007676_020 Hb_000856_180 Hb_000856_180 Hb_008066_070--Hb_000856_180 Hb_004631_210 Hb_004631_210 Hb_001049_020--Hb_004631_210 Hb_001341_100 Hb_001341_100 Hb_001049_020--Hb_001341_100 Hb_003442_070 Hb_003442_070 Hb_001049_020--Hb_003442_070 Hb_165669_010 Hb_165669_010 Hb_001049_020--Hb_165669_010 Hb_002577_010 Hb_002577_010 Hb_001049_020--Hb_002577_010 Hb_002631_200 Hb_002631_200 Hb_005433_060--Hb_002631_200 Hb_000699_230 Hb_000699_230 Hb_005433_060--Hb_000699_230 Hb_008511_100 Hb_008511_100 Hb_005433_060--Hb_008511_100 Hb_001268_120 Hb_001268_120 Hb_005433_060--Hb_001268_120 Hb_002153_030 Hb_002153_030 Hb_005433_060--Hb_002153_030 Hb_108329_020 Hb_108329_020 Hb_005433_060--Hb_108329_020 Hb_004032_420 Hb_004032_420 Hb_001621_070--Hb_004032_420 Hb_005048_020 Hb_005048_020 Hb_001621_070--Hb_005048_020 Hb_003609_020 Hb_003609_020 Hb_001621_070--Hb_003609_020 Hb_001004_110 Hb_001004_110 Hb_001621_070--Hb_001004_110 Hb_001621_070--Hb_008066_070 Hb_007382_050 Hb_007382_050 Hb_001433_180--Hb_007382_050 Hb_003623_070 Hb_003623_070 Hb_001433_180--Hb_003623_070 Hb_001433_180--Hb_000140_410 Hb_000260_290 Hb_000260_290 Hb_001433_180--Hb_000260_290 Hb_000796_250 Hb_000796_250 Hb_001433_180--Hb_000796_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.01572 7.21437 0.812951 1.42602 0.349075 0.970266
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.6073 3.05295 3.79168 6.92657 0.639212

CAGE analysis