Hb_011512_130

Information

Type -
Description -
Location Contig11512: 69044-73949
Sequence    

Annotation

kegg
ID rcu:RCOM_1023140
description BRASSINOSTEROID INSENSITIVE 1 precursor, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012077675.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
swissprot
ID O49318
description Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1
trembl
ID A0A067KAY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12930 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable leucine-rich repeat receptor-like protein kinase at2g33170

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04575: 69283-73933
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011512_130 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
2 Hb_005550_010 0.1151718924 - - PREDICTED: 3-ketoacyl-CoA synthase 4-like [Jatropha curcas]
3 Hb_008066_070 0.1221784429 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
4 Hb_002631_200 0.1385899954 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
5 Hb_002217_220 0.1531516073 - - hypothetical protein POPTR_0010s15930g [Populus trichocarpa]
6 Hb_005433_060 0.1564651554 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Jatropha curcas]
7 Hb_008221_170 0.1596080393 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Populus euphratica]
8 Hb_003327_070 0.1597248286 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
9 Hb_002700_080 0.16425339 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_24521 [Jatropha curcas]
10 Hb_002153_030 0.1651003932 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
11 Hb_008246_020 0.1682617608 - - amidophosphoribosyltransferase, putative [Ricinus communis]
12 Hb_000120_230 0.1700988498 - - PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like [Jatropha curcas]
13 Hb_011287_010 0.1716983746 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_007576_200 0.1740912913 - - amino acid transporter, putative [Ricinus communis]
15 Hb_006922_050 0.1758411986 - - PREDICTED: dipeptidyl peptidase 8 [Jatropha curcas]
16 Hb_007904_130 0.1771784604 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
17 Hb_020805_170 0.1784182322 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
18 Hb_008468_030 0.1798010962 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
19 Hb_000997_180 0.1798322022 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003090_100 0.1799706933 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]

Gene co-expression network

sample Hb_011512_130 Hb_011512_130 Hb_005550_010 Hb_005550_010 Hb_011512_130--Hb_005550_010 Hb_008066_070 Hb_008066_070 Hb_011512_130--Hb_008066_070 Hb_002631_200 Hb_002631_200 Hb_011512_130--Hb_002631_200 Hb_002217_220 Hb_002217_220 Hb_011512_130--Hb_002217_220 Hb_005433_060 Hb_005433_060 Hb_011512_130--Hb_005433_060 Hb_008221_170 Hb_008221_170 Hb_011512_130--Hb_008221_170 Hb_008246_020 Hb_008246_020 Hb_005550_010--Hb_008246_020 Hb_000120_230 Hb_000120_230 Hb_005550_010--Hb_000120_230 Hb_000792_040 Hb_000792_040 Hb_005550_010--Hb_000792_040 Hb_111051_010 Hb_111051_010 Hb_005550_010--Hb_111051_010 Hb_005550_010--Hb_002631_200 Hb_020805_170 Hb_020805_170 Hb_008066_070--Hb_020805_170 Hb_000140_410 Hb_000140_410 Hb_008066_070--Hb_000140_410 Hb_000905_170 Hb_000905_170 Hb_008066_070--Hb_000905_170 Hb_007676_020 Hb_007676_020 Hb_008066_070--Hb_007676_020 Hb_000856_180 Hb_000856_180 Hb_008066_070--Hb_000856_180 Hb_000083_270 Hb_000083_270 Hb_002631_200--Hb_000083_270 Hb_002153_030 Hb_002153_030 Hb_002631_200--Hb_002153_030 Hb_000009_120 Hb_000009_120 Hb_002631_200--Hb_000009_120 Hb_000571_160 Hb_000571_160 Hb_002631_200--Hb_000571_160 Hb_011861_080 Hb_011861_080 Hb_002631_200--Hb_011861_080 Hb_185830_070 Hb_185830_070 Hb_002631_200--Hb_185830_070 Hb_000260_660 Hb_000260_660 Hb_002217_220--Hb_000260_660 Hb_007765_030 Hb_007765_030 Hb_002217_220--Hb_007765_030 Hb_011287_010 Hb_011287_010 Hb_002217_220--Hb_011287_010 Hb_000395_220 Hb_000395_220 Hb_002217_220--Hb_000395_220 Hb_083799_010 Hb_083799_010 Hb_002217_220--Hb_083799_010 Hb_007426_140 Hb_007426_140 Hb_002217_220--Hb_007426_140 Hb_005433_060--Hb_002631_200 Hb_000699_230 Hb_000699_230 Hb_005433_060--Hb_000699_230 Hb_008511_100 Hb_008511_100 Hb_005433_060--Hb_008511_100 Hb_001268_120 Hb_001268_120 Hb_005433_060--Hb_001268_120 Hb_005433_060--Hb_002153_030 Hb_108329_020 Hb_108329_020 Hb_005433_060--Hb_108329_020 Hb_002046_020 Hb_002046_020 Hb_008221_170--Hb_002046_020 Hb_008221_170--Hb_002631_200 Hb_001105_160 Hb_001105_160 Hb_008221_170--Hb_001105_160 Hb_000487_380 Hb_000487_380 Hb_008221_170--Hb_000487_380 Hb_002662_050 Hb_002662_050 Hb_008221_170--Hb_002662_050 Hb_007576_200 Hb_007576_200 Hb_008221_170--Hb_007576_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.22441 20.5236 1.79294 13.1172 5.25045 3.55762
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.10867 4.10818 10.7058 22.1259 3.51857

CAGE analysis