Hb_001433_180

Information

Type -
Description -
Location Contig1433: 183328-184317
Sequence    

Annotation

kegg
ID rcu:RCOM_1434180
description hypothetical protein
nr
ID KDP23428.1
description hypothetical protein JCGZ_23261 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JKT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23261 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001433_180 0.0 - - hypothetical protein JCGZ_23261 [Jatropha curcas]
2 Hb_007382_050 0.1697767278 - - PREDICTED: uncharacterized protein LOC105645009 [Jatropha curcas]
3 Hb_031862_040 0.1724129093 - - purine transporter, putative [Ricinus communis]
4 Hb_003623_070 0.1732146765 - - ubiquitin-protein ligase, putative [Ricinus communis]
5 Hb_000140_410 0.1802577735 - - PREDICTED: uncharacterized protein At5g41620 isoform X1 [Jatropha curcas]
6 Hb_000260_290 0.1802929662 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
7 Hb_000796_250 0.1836463035 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
8 Hb_138585_110 0.1895506685 - - -
9 Hb_001529_050 0.1898587214 - - PREDICTED: ribulose bisphosphate carboxylase small chain clone 512-like [Jatropha curcas]
10 Hb_020805_170 0.2076029774 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
11 Hb_001504_120 0.2149008522 - - -
12 Hb_001114_070 0.2165044973 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
13 Hb_008066_070 0.2173583334 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
14 Hb_001269_690 0.2203030228 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001565_110 0.2244761328 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
16 Hb_001117_070 0.2292036487 - - 30S ribosomal protein S19, putative [Ricinus communis]
17 Hb_010334_020 0.2293546398 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Sesamum indicum]
18 Hb_006573_300 0.232055494 - - ATP binding protein, putative [Ricinus communis]
19 Hb_000645_210 0.2329604191 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
20 Hb_000086_660 0.2335706322 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001433_180 Hb_001433_180 Hb_007382_050 Hb_007382_050 Hb_001433_180--Hb_007382_050 Hb_031862_040 Hb_031862_040 Hb_001433_180--Hb_031862_040 Hb_003623_070 Hb_003623_070 Hb_001433_180--Hb_003623_070 Hb_000140_410 Hb_000140_410 Hb_001433_180--Hb_000140_410 Hb_000260_290 Hb_000260_290 Hb_001433_180--Hb_000260_290 Hb_000796_250 Hb_000796_250 Hb_001433_180--Hb_000796_250 Hb_007382_050--Hb_003623_070 Hb_001635_050 Hb_001635_050 Hb_007382_050--Hb_001635_050 Hb_002273_080 Hb_002273_080 Hb_007382_050--Hb_002273_080 Hb_001951_030 Hb_001951_030 Hb_007382_050--Hb_001951_030 Hb_005841_080 Hb_005841_080 Hb_007382_050--Hb_005841_080 Hb_001114_070 Hb_001114_070 Hb_031862_040--Hb_001114_070 Hb_008066_070 Hb_008066_070 Hb_031862_040--Hb_008066_070 Hb_001049_020 Hb_001049_020 Hb_031862_040--Hb_001049_020 Hb_005433_060 Hb_005433_060 Hb_031862_040--Hb_005433_060 Hb_001621_070 Hb_001621_070 Hb_031862_040--Hb_001621_070 Hb_003623_070--Hb_000140_410 Hb_001269_690 Hb_001269_690 Hb_003623_070--Hb_001269_690 Hb_004788_040 Hb_004788_040 Hb_003623_070--Hb_004788_040 Hb_001529_050 Hb_001529_050 Hb_003623_070--Hb_001529_050 Hb_003623_070--Hb_001635_050 Hb_002273_050 Hb_002273_050 Hb_003623_070--Hb_002273_050 Hb_000140_410--Hb_001269_690 Hb_000140_410--Hb_008066_070 Hb_020805_170 Hb_020805_170 Hb_000140_410--Hb_020805_170 Hb_000905_170 Hb_000905_170 Hb_000140_410--Hb_000905_170 Hb_000140_410--Hb_001529_050 Hb_000260_290--Hb_000796_250 Hb_015690_020 Hb_015690_020 Hb_000260_290--Hb_015690_020 Hb_001565_110 Hb_001565_110 Hb_000260_290--Hb_001565_110 Hb_003052_220 Hb_003052_220 Hb_000260_290--Hb_003052_220 Hb_000260_290--Hb_031862_040 Hb_138585_110 Hb_138585_110 Hb_000796_250--Hb_138585_110 Hb_001117_070 Hb_001117_070 Hb_000796_250--Hb_001117_070 Hb_000318_200 Hb_000318_200 Hb_000796_250--Hb_000318_200 Hb_000796_250--Hb_001049_020 Hb_004230_040 Hb_004230_040 Hb_000796_250--Hb_004230_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.498497 4.18888 0.190374 0.415878 0.238354 0.545011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.59077 1.25113 1.26202 4.43192 0

CAGE analysis