Hb_004235_060

Information

Type -
Description -
Location Contig4235: 57615-60582
Sequence    

Annotation

kegg
ID rcu:RCOM_1504210
description mitochondrial phosphate carrier protein, putative
nr
ID AIY24426.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q9FMU6
description Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MPT3 PE=2 SV=1
trembl
ID A0A0A1E371
description Phosphate transporter OS=Manihot esculenta GN=PT3;4 PE=2 SV=1
Gene Ontology
ID GO:0005618
description phosphate transporter

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41871: 57634-58789
cDNA
(Sanger)
(ID:Location)		 017_F03r.ab1: 61061-62136 , 043_G02r.ab1: 61108-62091

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004235_060 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_006120_170 0.1341164116 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108-like [Populus euphratica]
3 Hb_000252_080 0.1489852572 - - PREDICTED: uncharacterized protein LOC105644644 [Jatropha curcas]
4 Hb_000347_020 0.162658067 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
5 Hb_009083_010 0.1766443 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
6 Hb_006615_160 0.1870490224 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
7 Hb_031108_010 0.188166339 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
8 Hb_004007_120 0.1899931434 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform X1 [Populus euphratica]
9 Hb_000914_130 0.1919823249 - - copper-transporting atpase p-type, putative [Ricinus communis]
10 Hb_005348_090 0.1921910739 transcription factor TF Family: Tify plastid jasmonates ZIM-domain protein [Hevea brasiliensis]
11 Hb_000752_020 0.1947329315 - - PREDICTED: uncharacterized protein LOC105641803 isoform X1 [Jatropha curcas]
12 Hb_005814_010 0.1961300624 - - ATP binding protein, putative [Ricinus communis]
13 Hb_000031_160 0.1982721868 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
14 Hb_002030_180 0.1992808449 - - ring finger protein, putative [Ricinus communis]
15 Hb_000853_100 0.1992920473 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
16 Hb_000552_090 0.2000919045 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
17 Hb_000051_030 0.2011564941 - - PREDICTED: E3 ubiquitin-protein ligase SINAT2-like [Jatropha curcas]
18 Hb_000473_080 0.2071774678 - - PREDICTED: lipase-like PAD4 [Populus euphratica]
19 Hb_005357_270 0.2087875623 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
20 Hb_133845_010 0.2113155866 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004235_060 Hb_004235_060 Hb_006120_170 Hb_006120_170 Hb_004235_060--Hb_006120_170 Hb_000252_080 Hb_000252_080 Hb_004235_060--Hb_000252_080 Hb_000347_020 Hb_000347_020 Hb_004235_060--Hb_000347_020 Hb_009083_010 Hb_009083_010 Hb_004235_060--Hb_009083_010 Hb_006615_160 Hb_006615_160 Hb_004235_060--Hb_006615_160 Hb_031108_010 Hb_031108_010 Hb_004235_060--Hb_031108_010 Hb_006120_170--Hb_000252_080 Hb_009775_040 Hb_009775_040 Hb_006120_170--Hb_009775_040 Hb_000914_130 Hb_000914_130 Hb_006120_170--Hb_000914_130 Hb_000752_020 Hb_000752_020 Hb_006120_170--Hb_000752_020 Hb_001374_040 Hb_001374_040 Hb_006120_170--Hb_001374_040 Hb_000252_080--Hb_000752_020 Hb_000252_080--Hb_009083_010 Hb_004459_110 Hb_004459_110 Hb_000252_080--Hb_004459_110 Hb_006970_150 Hb_006970_150 Hb_000252_080--Hb_006970_150 Hb_000051_030 Hb_000051_030 Hb_000347_020--Hb_000051_030 Hb_001318_110 Hb_001318_110 Hb_000347_020--Hb_001318_110 Hb_000347_020--Hb_006615_160 Hb_005649_010 Hb_005649_010 Hb_000347_020--Hb_005649_010 Hb_000110_030 Hb_000110_030 Hb_000347_020--Hb_000110_030 Hb_022206_030 Hb_022206_030 Hb_009083_010--Hb_022206_030 Hb_174380_010 Hb_174380_010 Hb_009083_010--Hb_174380_010 Hb_006634_080 Hb_006634_080 Hb_009083_010--Hb_006634_080 Hb_005357_270 Hb_005357_270 Hb_009083_010--Hb_005357_270 Hb_000133_060 Hb_000133_060 Hb_009083_010--Hb_000133_060 Hb_017857_010 Hb_017857_010 Hb_006615_160--Hb_017857_010 Hb_001329_080 Hb_001329_080 Hb_006615_160--Hb_001329_080 Hb_000853_100 Hb_000853_100 Hb_006615_160--Hb_000853_100 Hb_000009_300 Hb_000009_300 Hb_006615_160--Hb_000009_300 Hb_002030_180 Hb_002030_180 Hb_006615_160--Hb_002030_180 Hb_000172_050 Hb_000172_050 Hb_006615_160--Hb_000172_050 Hb_009476_110 Hb_009476_110 Hb_031108_010--Hb_009476_110 Hb_000776_050 Hb_000776_050 Hb_031108_010--Hb_000776_050 Hb_124677_020 Hb_124677_020 Hb_031108_010--Hb_124677_020 Hb_001579_070 Hb_001579_070 Hb_031108_010--Hb_001579_070 Hb_155946_030 Hb_155946_030 Hb_031108_010--Hb_155946_030 Hb_000086_620 Hb_000086_620 Hb_031108_010--Hb_000086_620
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0440893 6.14859 3.8266 1.81853 0 0.0136041
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.433546 0.70653 0.228931 2.39206 0.101969

CAGE analysis