Hb_000948_080

Information

Type -
Description -
Location Contig948: 115396-116283
Sequence    

Annotation

kegg
ID rcu:RCOM_0517320
description hypothetical protein
nr
ID XP_012072971.1
description PREDICTED: uncharacterized protein LOC105634692 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06758 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000948_080 0.0 - - PREDICTED: uncharacterized protein LOC105634692 [Jatropha curcas]
2 Hb_021888_050 0.1370751192 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
3 Hb_000975_360 0.1436790288 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000402_210 0.1554525879 - - hypothetical protein EUGRSUZ_B032971, partial [Eucalyptus grandis]
5 Hb_110560_010 0.1681592317 - - ATP binding protein, putative [Ricinus communis]
6 Hb_002374_380 0.1698949674 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
7 Hb_028487_020 0.1700162553 - - hypothetical protein POPTR_0010s11880g [Populus trichocarpa]
8 Hb_002042_130 0.170415875 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-3 [Jatropha curcas]
9 Hb_001049_020 0.1716027227 - - conserved hypothetical protein [Ricinus communis]
10 Hb_010050_050 0.1720094964 - - PREDICTED: piezo-type mechanosensitive ion channel homolog isoform X2 [Jatropha curcas]
11 Hb_011618_060 0.1728710128 - - PREDICTED: DNA-repair protein XRCC1 [Jatropha curcas]
12 Hb_000451_070 0.173294726 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_088753_010 0.1744117061 - - PREDICTED: copper amine oxidase 1-like [Vitis vinifera]
14 Hb_005568_080 0.1771532631 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000326_060 0.1784825341 - - PREDICTED: uncharacterized protein LOC104214925 [Nicotiana sylvestris]
16 Hb_000225_060 0.180061361 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
17 Hb_165669_010 0.1806186786 - - PREDICTED: MATH domain-containing protein At5g43560-like isoform X1 [Jatropha curcas]
18 Hb_061195_020 0.1833049636 - - PREDICTED: uncharacterized protein LOC101990594 [Microtus ochrogaster]
19 Hb_115241_010 0.1839581991 - - PREDICTED: protein UPSTREAM OF FLC [Jatropha curcas]
20 Hb_000694_060 0.1840516328 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000948_080 Hb_000948_080 Hb_021888_050 Hb_021888_050 Hb_000948_080--Hb_021888_050 Hb_000975_360 Hb_000975_360 Hb_000948_080--Hb_000975_360 Hb_000402_210 Hb_000402_210 Hb_000948_080--Hb_000402_210 Hb_110560_010 Hb_110560_010 Hb_000948_080--Hb_110560_010 Hb_002374_380 Hb_002374_380 Hb_000948_080--Hb_002374_380 Hb_028487_020 Hb_028487_020 Hb_000948_080--Hb_028487_020 Hb_115241_010 Hb_115241_010 Hb_021888_050--Hb_115241_010 Hb_021888_050--Hb_000975_360 Hb_000649_240 Hb_000649_240 Hb_021888_050--Hb_000649_240 Hb_005568_080 Hb_005568_080 Hb_021888_050--Hb_005568_080 Hb_001902_190 Hb_001902_190 Hb_021888_050--Hb_001902_190 Hb_000975_360--Hb_115241_010 Hb_002042_130 Hb_002042_130 Hb_000975_360--Hb_002042_130 Hb_000465_230 Hb_000465_230 Hb_000975_360--Hb_000465_230 Hb_001189_140 Hb_001189_140 Hb_000975_360--Hb_001189_140 Hb_001894_050 Hb_001894_050 Hb_000975_360--Hb_001894_050 Hb_088753_010 Hb_088753_010 Hb_000402_210--Hb_088753_010 Hb_000302_260 Hb_000302_260 Hb_000402_210--Hb_000302_260 Hb_000451_070 Hb_000451_070 Hb_000402_210--Hb_000451_070 Hb_000402_210--Hb_002042_130 Hb_007382_120 Hb_007382_120 Hb_000402_210--Hb_007382_120 Hb_006538_080 Hb_006538_080 Hb_000402_210--Hb_006538_080 Hb_000225_060 Hb_000225_060 Hb_110560_010--Hb_000225_060 Hb_008566_050 Hb_008566_050 Hb_110560_010--Hb_008566_050 Hb_004705_080 Hb_004705_080 Hb_110560_010--Hb_004705_080 Hb_000099_150 Hb_000099_150 Hb_110560_010--Hb_000099_150 Hb_000045_300 Hb_000045_300 Hb_110560_010--Hb_000045_300 Hb_091433_020 Hb_091433_020 Hb_110560_010--Hb_091433_020 Hb_000694_060 Hb_000694_060 Hb_002374_380--Hb_000694_060 Hb_001433_110 Hb_001433_110 Hb_002374_380--Hb_001433_110 Hb_004453_080 Hb_004453_080 Hb_002374_380--Hb_004453_080 Hb_105602_010 Hb_105602_010 Hb_002374_380--Hb_105602_010 Hb_003442_070 Hb_003442_070 Hb_002374_380--Hb_003442_070 Hb_007850_080 Hb_007850_080 Hb_002374_380--Hb_007850_080 Hb_028487_020--Hb_000302_260 Hb_005306_190 Hb_005306_190 Hb_028487_020--Hb_005306_190 Hb_002097_200 Hb_002097_200 Hb_028487_020--Hb_002097_200 Hb_000432_040 Hb_000432_040 Hb_028487_020--Hb_000432_040 Hb_028487_020--Hb_000451_070 Hb_001564_080 Hb_001564_080 Hb_028487_020--Hb_001564_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.4492 64.9477 24.9247 23.7856 10.7665 8.76664
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
43.697 98.9219 34.2299 51.0422 2.90983

CAGE analysis