Hb_006501_160

Information

Type -
Description -
Location Contig6501: 158511-163971
Sequence    

Annotation

kegg
ID cit:102577960
description hexokinase
nr
ID XP_012076877.1
description PREDICTED: hexokinase-1-like [Jatropha curcas]
swissprot
ID Q42525
description Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2
trembl
ID A0A067KC63
description Hexokinase OS=Jatropha curcas GN=JCGZ_07372 PE=3 SV=1
Gene Ontology
ID GO:0004396
description hexokinase-1-like isoform x3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52543: 158624-163960 , PASA_asmbl_52544: 158903-160412 , PASA_asmbl_52545: 160791-161703
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006501_160 0.0 - - PREDICTED: hexokinase-1-like [Jatropha curcas]
2 Hb_073171_100 0.0835955386 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
3 Hb_000347_450 0.0957688074 - - PREDICTED: tRNA(His) guanylyltransferase 1-like isoform X2 [Jatropha curcas]
4 Hb_000302_200 0.0975193828 - - ornithine cyclodeaminase, putative [Ricinus communis]
5 Hb_028960_030 0.0984854587 - - Short-chain dehydrogenase-reductase B [Theobroma cacao]
6 Hb_001269_380 0.101078163 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
7 Hb_000997_180 0.1016398799 - - conserved hypothetical protein [Ricinus communis]
8 Hb_011671_270 0.1032292423 - - phosphofructokinase [Hevea brasiliensis]
9 Hb_000088_270 0.1050994335 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
10 Hb_001019_050 0.1067112528 - - PREDICTED: importin-13 [Jatropha curcas]
11 Hb_025336_020 0.1094964775 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
12 Hb_011224_160 0.1104837475 transcription factor, rubber biosynthesis TF Family: HSF, Gene Name: Farnesyl diphosphate synthase PREDICTED: heat stress transcription factor A-5 [Jatropha curcas]
13 Hb_007747_080 0.1114800362 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002213_020 0.1126198548 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
15 Hb_007423_050 0.1126508192 - - PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
16 Hb_082741_010 0.1155547615 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
17 Hb_000345_320 0.116489956 transcription factor TF Family: MYB-related PREDICTED: protein ALWAYS EARLY 2-like isoform X1 [Jatropha curcas]
18 Hb_000792_040 0.1171288346 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
19 Hb_000565_040 0.117191366 - - RecName: Full=Superoxide dismutase [Mn], mitochondrial; Flags: Precursor [Hevea brasiliensis]
20 Hb_016347_010 0.1185276991 - - protein transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_006501_160 Hb_006501_160 Hb_073171_100 Hb_073171_100 Hb_006501_160--Hb_073171_100 Hb_000347_450 Hb_000347_450 Hb_006501_160--Hb_000347_450 Hb_000302_200 Hb_000302_200 Hb_006501_160--Hb_000302_200 Hb_028960_030 Hb_028960_030 Hb_006501_160--Hb_028960_030 Hb_001269_380 Hb_001269_380 Hb_006501_160--Hb_001269_380 Hb_000997_180 Hb_000997_180 Hb_006501_160--Hb_000997_180 Hb_073171_100--Hb_000347_450 Hb_011224_160 Hb_011224_160 Hb_073171_100--Hb_011224_160 Hb_001731_030 Hb_001731_030 Hb_073171_100--Hb_001731_030 Hb_001019_050 Hb_001019_050 Hb_073171_100--Hb_001019_050 Hb_016347_010 Hb_016347_010 Hb_073171_100--Hb_016347_010 Hb_000347_450--Hb_011224_160 Hb_000088_270 Hb_000088_270 Hb_000347_450--Hb_000088_270 Hb_000684_040 Hb_000684_040 Hb_000347_450--Hb_000684_040 Hb_050847_050 Hb_050847_050 Hb_000347_450--Hb_050847_050 Hb_010775_040 Hb_010775_040 Hb_000347_450--Hb_010775_040 Hb_000183_090 Hb_000183_090 Hb_000347_450--Hb_000183_090 Hb_000792_040 Hb_000792_040 Hb_000302_200--Hb_000792_040 Hb_004994_090 Hb_004994_090 Hb_000302_200--Hb_004994_090 Hb_001031_090 Hb_001031_090 Hb_000302_200--Hb_001031_090 Hb_005215_020 Hb_005215_020 Hb_000302_200--Hb_005215_020 Hb_002995_040 Hb_002995_040 Hb_000302_200--Hb_002995_040 Hb_028960_030--Hb_011224_160 Hb_003683_010 Hb_003683_010 Hb_028960_030--Hb_003683_010 Hb_000979_220 Hb_000979_220 Hb_028960_030--Hb_000979_220 Hb_011671_270 Hb_011671_270 Hb_028960_030--Hb_011671_270 Hb_011674_040 Hb_011674_040 Hb_028960_030--Hb_011674_040 Hb_021576_010 Hb_021576_010 Hb_028960_030--Hb_021576_010 Hb_010407_080 Hb_010407_080 Hb_001269_380--Hb_010407_080 Hb_004677_050 Hb_004677_050 Hb_001269_380--Hb_004677_050 Hb_016172_030 Hb_016172_030 Hb_001269_380--Hb_016172_030 Hb_002982_020 Hb_002982_020 Hb_001269_380--Hb_002982_020 Hb_006452_120 Hb_006452_120 Hb_001269_380--Hb_006452_120 Hb_008948_020 Hb_008948_020 Hb_001269_380--Hb_008948_020 Hb_000699_230 Hb_000699_230 Hb_000997_180--Hb_000699_230 Hb_002915_060 Hb_002915_060 Hb_000997_180--Hb_002915_060 Hb_000625_090 Hb_000625_090 Hb_000997_180--Hb_000625_090 Hb_003327_070 Hb_003327_070 Hb_000997_180--Hb_003327_070 Hb_000490_060 Hb_000490_060 Hb_000997_180--Hb_000490_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.3222 33.4532 16.3222 23.2374 10.2468 8.30877
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.5061 14.8292 13.3322 41.7877 23.4521

CAGE analysis