Hb_004631_090

Information

Type -
Description -
Location Contig4631: 64306-69540
Sequence    

Annotation

kegg
ID rcu:RCOM_0831760
description hypothetical protein
nr
ID XP_012081630.1
description PREDICTED: probable glucan 1,3-beta-glucosidase A [Jatropha curcas]
swissprot
ID A1CRV0
description Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2
trembl
ID A0A067KD51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18669 PE=3 SV=1
Gene Ontology
ID GO:0004338
description probable glucan -beta-glucosidase a isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43854: 64079-65866 , PASA_asmbl_43855: 67007-67307 , PASA_asmbl_43856: 67634-69328 , PASA_asmbl_43857: 69564-69806 , PASA_asmbl_43858: 69354-70116
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004631_090 0.0 - - PREDICTED: probable glucan 1,3-beta-glucosidase A [Jatropha curcas]
2 Hb_012573_050 0.1008782823 - - choline/ethanolamine kinase family protein [Populus trichocarpa]
3 Hb_004644_030 0.1061712514 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
4 Hb_048093_010 0.1064000195 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
5 Hb_007441_310 0.1081856436 - - PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Jatropha curcas]
6 Hb_156850_100 0.1095215147 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]
7 Hb_042083_040 0.1099715869 - - conserved hypothetical protein [Ricinus communis]
8 Hb_174865_040 0.1107582243 - - PREDICTED: crt homolog 1 isoform X2 [Jatropha curcas]
9 Hb_029920_030 0.1120147862 - - PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Jatropha curcas]
10 Hb_001789_200 0.1133718868 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
11 Hb_001578_020 0.113612306 - - Protein virR, putative [Ricinus communis]
12 Hb_000480_040 0.1137186452 - - PREDICTED: L-Ala-D/L-amino acid epimerase isoform X2 [Jatropha curcas]
13 Hb_003875_030 0.1141666346 - - PREDICTED: probable plastidic glucose transporter 1 [Jatropha curcas]
14 Hb_008375_010 0.1143564931 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Pyrus x bretschneideri]
15 Hb_000816_200 0.1177404817 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
16 Hb_003642_010 0.1191199707 - - PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X2 [Jatropha curcas]
17 Hb_007054_070 0.1203997396 - - PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Jatropha curcas]
18 Hb_055619_010 0.1212299671 - - PREDICTED: uncharacterized protein LOC105632456 isoform X2 [Jatropha curcas]
19 Hb_007534_050 0.1218200006 - - PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 [Jatropha curcas]
20 Hb_001449_070 0.1222472221 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004631_090 Hb_004631_090 Hb_012573_050 Hb_012573_050 Hb_004631_090--Hb_012573_050 Hb_004644_030 Hb_004644_030 Hb_004631_090--Hb_004644_030 Hb_048093_010 Hb_048093_010 Hb_004631_090--Hb_048093_010 Hb_007441_310 Hb_007441_310 Hb_004631_090--Hb_007441_310 Hb_156850_100 Hb_156850_100 Hb_004631_090--Hb_156850_100 Hb_042083_040 Hb_042083_040 Hb_004631_090--Hb_042083_040 Hb_000244_180 Hb_000244_180 Hb_012573_050--Hb_000244_180 Hb_012573_050--Hb_156850_100 Hb_000721_030 Hb_000721_030 Hb_012573_050--Hb_000721_030 Hb_000116_130 Hb_000116_130 Hb_012573_050--Hb_000116_130 Hb_000167_110 Hb_000167_110 Hb_012573_050--Hb_000167_110 Hb_007975_060 Hb_007975_060 Hb_012573_050--Hb_007975_060 Hb_002762_110 Hb_002762_110 Hb_004644_030--Hb_002762_110 Hb_000077_150 Hb_000077_150 Hb_004644_030--Hb_000077_150 Hb_000622_290 Hb_000622_290 Hb_004644_030--Hb_000622_290 Hb_008147_080 Hb_008147_080 Hb_004644_030--Hb_008147_080 Hb_003053_110 Hb_003053_110 Hb_004644_030--Hb_003053_110 Hb_001578_020 Hb_001578_020 Hb_004644_030--Hb_001578_020 Hb_000941_100 Hb_000941_100 Hb_048093_010--Hb_000941_100 Hb_048093_010--Hb_003053_110 Hb_012150_030 Hb_012150_030 Hb_048093_010--Hb_012150_030 Hb_048093_010--Hb_156850_100 Hb_000291_180 Hb_000291_180 Hb_048093_010--Hb_000291_180 Hb_134849_010 Hb_134849_010 Hb_048093_010--Hb_134849_010 Hb_008375_010 Hb_008375_010 Hb_007441_310--Hb_008375_010 Hb_032631_070 Hb_032631_070 Hb_007441_310--Hb_032631_070 Hb_000585_110 Hb_000585_110 Hb_007441_310--Hb_000585_110 Hb_000397_150 Hb_000397_150 Hb_007441_310--Hb_000397_150 Hb_055690_010 Hb_055690_010 Hb_007441_310--Hb_055690_010 Hb_001195_770 Hb_001195_770 Hb_007441_310--Hb_001195_770 Hb_160271_010 Hb_160271_010 Hb_156850_100--Hb_160271_010 Hb_174865_040 Hb_174865_040 Hb_156850_100--Hb_174865_040 Hb_002631_240 Hb_002631_240 Hb_156850_100--Hb_002631_240 Hb_001882_010 Hb_001882_010 Hb_156850_100--Hb_001882_010 Hb_042083_040--Hb_174865_040 Hb_001976_030 Hb_001976_030 Hb_042083_040--Hb_001976_030 Hb_001628_120 Hb_001628_120 Hb_042083_040--Hb_001628_120 Hb_042083_040--Hb_156850_100 Hb_000049_180 Hb_000049_180 Hb_042083_040--Hb_000049_180 Hb_000096_190 Hb_000096_190 Hb_042083_040--Hb_000096_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.469522 0.280211 1.71148 1.7944 0.350178 1.11566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.868852 0.75193 0.858272 0.836031 2.81992

CAGE analysis