Hb_048093_010

Information

Type -
Description -
Location Contig48093: 638-1527
Sequence    

Annotation

kegg
ID rcu:RCOM_1027630
description hypothetical protein
nr
ID XP_012077665.1
description PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
swissprot
ID F4I111
description Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana GN=At1g09575 PE=2 SV=1
trembl
ID A0A067LML8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17266 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048093_010 0.0 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
2 Hb_000941_100 0.0610960874 - - thioredoxin-like 5 mRNA family protein [Populus trichocarpa]
3 Hb_003053_110 0.0622378862 - - PREDICTED: protease Do-like 1, chloroplastic [Jatropha curcas]
4 Hb_012150_030 0.0632649394 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
5 Hb_156850_100 0.0742033305 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]
6 Hb_000291_180 0.0766844354 - - PREDICTED: meiotically up-regulated gene 185 protein [Jatropha curcas]
7 Hb_134849_010 0.0781646935 - - ATP synthase subunit d, putative [Ricinus communis]
8 Hb_008705_020 0.0795002163 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
9 Hb_004452_120 0.0801917793 - - PREDICTED: uncharacterized protein LOC105639574 [Jatropha curcas]
10 Hb_001504_030 0.0807422114 - - PREDICTED: probable CCR4-associated factor 1 homolog 6 [Jatropha curcas]
11 Hb_000270_480 0.0833629833 - - Mannose-1-phosphate guanyltransferase alpha [Gossypium arboreum]
12 Hb_001195_770 0.0868382292 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
13 Hb_000108_020 0.0874015459 - - hypothetical protein POPTR_0019s02430g [Populus trichocarpa]
14 Hb_001882_010 0.0875632985 - - -
15 Hb_000167_110 0.0886438258 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
16 Hb_000086_080 0.089792811 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000212_120 0.0920346127 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
18 Hb_000032_500 0.0939975446 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
19 Hb_006907_060 0.0945310284 - - Alternative oxidase 4, chloroplast precursor, putative [Ricinus communis]
20 Hb_011671_260 0.0948515399 - - PREDICTED: putative lipase ROG1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_048093_010 Hb_048093_010 Hb_000941_100 Hb_000941_100 Hb_048093_010--Hb_000941_100 Hb_003053_110 Hb_003053_110 Hb_048093_010--Hb_003053_110 Hb_012150_030 Hb_012150_030 Hb_048093_010--Hb_012150_030 Hb_156850_100 Hb_156850_100 Hb_048093_010--Hb_156850_100 Hb_000291_180 Hb_000291_180 Hb_048093_010--Hb_000291_180 Hb_134849_010 Hb_134849_010 Hb_048093_010--Hb_134849_010 Hb_000941_100--Hb_003053_110 Hb_001195_770 Hb_001195_770 Hb_000941_100--Hb_001195_770 Hb_000941_100--Hb_012150_030 Hb_006907_060 Hb_006907_060 Hb_000941_100--Hb_006907_060 Hb_005539_010 Hb_005539_010 Hb_000941_100--Hb_005539_010 Hb_003053_110--Hb_012150_030 Hb_008705_020 Hb_008705_020 Hb_003053_110--Hb_008705_020 Hb_003053_110--Hb_001195_770 Hb_007741_110 Hb_007741_110 Hb_003053_110--Hb_007741_110 Hb_003053_110--Hb_134849_010 Hb_004452_120 Hb_004452_120 Hb_012150_030--Hb_004452_120 Hb_010863_050 Hb_010863_050 Hb_012150_030--Hb_010863_050 Hb_012150_030--Hb_134849_010 Hb_160271_010 Hb_160271_010 Hb_156850_100--Hb_160271_010 Hb_174865_040 Hb_174865_040 Hb_156850_100--Hb_174865_040 Hb_002631_240 Hb_002631_240 Hb_156850_100--Hb_002631_240 Hb_012573_050 Hb_012573_050 Hb_156850_100--Hb_012573_050 Hb_001882_010 Hb_001882_010 Hb_156850_100--Hb_001882_010 Hb_000291_180--Hb_160271_010 Hb_000291_180--Hb_001882_010 Hb_000108_020 Hb_000108_020 Hb_000291_180--Hb_000108_020 Hb_000680_010 Hb_000680_010 Hb_000291_180--Hb_000680_010 Hb_068079_010 Hb_068079_010 Hb_000291_180--Hb_068079_010 Hb_000032_500 Hb_000032_500 Hb_134849_010--Hb_000032_500 Hb_002774_190 Hb_002774_190 Hb_134849_010--Hb_002774_190 Hb_033312_010 Hb_033312_010 Hb_134849_010--Hb_033312_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.36237 2.18232 5.7208 5.70072 1.70687 2.532
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.64516 2.77178 2.22607 2.63195 8.43346

CAGE analysis