Hb_000397_150

Information

Type -
Description -
Location Contig397: 261096-275382
Sequence    

Annotation

kegg
ID pop:POPTR_0006s05930g
description hypothetical protein
nr
ID XP_012081124.1
description PREDICTED: probable flavin-containing monooxygenase 1 [Jatropha curcas]
swissprot
ID Q0WPT7
description Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana GN=At2g41040 PE=2 SV=1
trembl
ID A0A067KD92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16977 PE=4 SV=1
Gene Ontology
ID GO:0004499
description probable flavin-containing monooxygenase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39612: 260872-264949 , PASA_asmbl_39613: 265090-267310 , PASA_asmbl_39614: 274301-274573
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000397_150 0.0 - - PREDICTED: probable flavin-containing monooxygenase 1 [Jatropha curcas]
2 Hb_007441_310 0.072428355 - - PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Jatropha curcas]
3 Hb_000114_150 0.0852243008 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
4 Hb_001628_120 0.0911428273 - - putative ascorbate peroxidase, partial [Taraxacum brevicorniculatum]
5 Hb_048093_010 0.0970763313 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
6 Hb_001195_770 0.0978172389 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
7 Hb_032631_070 0.0986777056 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
8 Hb_025194_050 0.1010219083 - - PREDICTED: uncharacterized protein LOC105644851 isoform X1 [Jatropha curcas]
9 Hb_055690_010 0.1021583122 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
10 Hb_000816_200 0.1021997464 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
11 Hb_001675_140 0.1028160817 - - hypothetical protein L484_026216 [Morus notabilis]
12 Hb_000120_990 0.1039278434 - - PREDICTED: MATE efflux family protein 3, chloroplastic-like [Jatropha curcas]
13 Hb_002053_010 0.1040115565 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Jatropha curcas]
14 Hb_042083_040 0.1048407338 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000270_480 0.1051264163 - - Mannose-1-phosphate guanyltransferase alpha [Gossypium arboreum]
16 Hb_000585_110 0.1065913758 - - PREDICTED: probable protein phosphatase 2C 66 [Jatropha curcas]
17 Hb_008705_020 0.1077369752 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
18 Hb_016219_030 0.1081520567 - - cytochrome P450, putative [Ricinus communis]
19 Hb_002075_030 0.1082848349 - - PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Jatropha curcas]
20 Hb_005305_020 0.109118636 - - PREDICTED: dicarboxylate transporter 1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000397_150 Hb_000397_150 Hb_007441_310 Hb_007441_310 Hb_000397_150--Hb_007441_310 Hb_000114_150 Hb_000114_150 Hb_000397_150--Hb_000114_150 Hb_001628_120 Hb_001628_120 Hb_000397_150--Hb_001628_120 Hb_048093_010 Hb_048093_010 Hb_000397_150--Hb_048093_010 Hb_001195_770 Hb_001195_770 Hb_000397_150--Hb_001195_770 Hb_032631_070 Hb_032631_070 Hb_000397_150--Hb_032631_070 Hb_008375_010 Hb_008375_010 Hb_007441_310--Hb_008375_010 Hb_007441_310--Hb_032631_070 Hb_000585_110 Hb_000585_110 Hb_007441_310--Hb_000585_110 Hb_055690_010 Hb_055690_010 Hb_007441_310--Hb_055690_010 Hb_007441_310--Hb_001195_770 Hb_000816_200 Hb_000816_200 Hb_000114_150--Hb_000816_200 Hb_000107_590 Hb_000107_590 Hb_000114_150--Hb_000107_590 Hb_000189_450 Hb_000189_450 Hb_000114_150--Hb_000189_450 Hb_000114_150--Hb_007441_310 Hb_000983_070 Hb_000983_070 Hb_000114_150--Hb_000983_070 Hb_001976_030 Hb_001976_030 Hb_001628_120--Hb_001976_030 Hb_000684_390 Hb_000684_390 Hb_001628_120--Hb_000684_390 Hb_042083_040 Hb_042083_040 Hb_001628_120--Hb_042083_040 Hb_000049_180 Hb_000049_180 Hb_001628_120--Hb_000049_180 Hb_001628_120--Hb_007441_310 Hb_000941_100 Hb_000941_100 Hb_048093_010--Hb_000941_100 Hb_003053_110 Hb_003053_110 Hb_048093_010--Hb_003053_110 Hb_012150_030 Hb_012150_030 Hb_048093_010--Hb_012150_030 Hb_156850_100 Hb_156850_100 Hb_048093_010--Hb_156850_100 Hb_000291_180 Hb_000291_180 Hb_048093_010--Hb_000291_180 Hb_134849_010 Hb_134849_010 Hb_048093_010--Hb_134849_010 Hb_008705_020 Hb_008705_020 Hb_001195_770--Hb_008705_020 Hb_001195_770--Hb_003053_110 Hb_001195_770--Hb_000941_100 Hb_001195_770--Hb_000816_200 Hb_006907_060 Hb_006907_060 Hb_001195_770--Hb_006907_060 Hb_002762_110 Hb_002762_110 Hb_001195_770--Hb_002762_110 Hb_000579_040 Hb_000579_040 Hb_032631_070--Hb_000579_040 Hb_002075_030 Hb_002075_030 Hb_032631_070--Hb_002075_030 Hb_002150_020 Hb_002150_020 Hb_032631_070--Hb_002150_020 Hb_138585_030 Hb_138585_030 Hb_032631_070--Hb_138585_030 Hb_032631_070--Hb_000585_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.15826 2.81204 6.5681 6.69849 0.98466 1.38384
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.07754 2.78376 2.07445 2.86821 10.9024

CAGE analysis