Hb_004291_040

Information

Type -
Description -
Location Contig4291: 119446-124913
Sequence    

Annotation

kegg
ID cit:102577960
description hexokinase
nr
ID AHY84731.1
description hexokinase [Manihot esculenta]
swissprot
ID Q9SEK2
description Hexokinase-1 OS=Nicotiana tabacum GN=HXK1 PE=2 SV=1
trembl
ID A0A023ZY40
description Hexokinase OS=Manihot esculenta GN=HXK2 PE=2 SV=1
Gene Ontology
ID GO:0004396
description hexokinase-1-like isoform x3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42131: 119630-124923
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004291_040 0.0 - - hexokinase [Manihot esculenta]
2 Hb_027402_130 0.0843678196 - - malate dehydrogenase, putative [Ricinus communis]
3 Hb_000243_120 0.1103764405 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
4 Hb_001564_070 0.1124038873 - - PREDICTED: G patch domain-containing protein TGH [Jatropha curcas]
5 Hb_106890_010 0.1157068156 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
6 Hb_000009_030 0.1160895193 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
7 Hb_028960_030 0.1167971721 - - Short-chain dehydrogenase-reductase B [Theobroma cacao]
8 Hb_011674_040 0.1178045769 - - PREDICTED: uncharacterized protein LOC105648163 isoform X1 [Jatropha curcas]
9 Hb_000270_170 0.1182398643 - - PREDICTED: formin-like protein 5 [Jatropha curcas]
10 Hb_003440_020 0.1186434546 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
11 Hb_013749_050 0.1223883328 - - PREDICTED: uncharacterized protein LOC105647765 isoform X2 [Jatropha curcas]
12 Hb_005015_110 0.1227362144 - - PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Jatropha curcas]
13 Hb_004111_030 0.1230113048 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
14 Hb_001504_060 0.1232501785 - - PREDICTED: nuclear pore complex protein NUP93A-like [Jatropha curcas]
15 Hb_005260_030 0.123400274 - - PREDICTED: uncharacterized protein LOC105633782 [Jatropha curcas]
16 Hb_003355_010 0.1244873112 - - Heat shock 70 kDa protein, putative [Ricinus communis]
17 Hb_002908_040 0.125923455 - - DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative [Ricinus communis]
18 Hb_000358_020 0.1263616289 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
19 Hb_010872_050 0.1267696967 - - hypothetical protein B456_007G078100 [Gossypium raimondii]
20 Hb_030736_040 0.1268062086 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004291_040 Hb_004291_040 Hb_027402_130 Hb_027402_130 Hb_004291_040--Hb_027402_130 Hb_000243_120 Hb_000243_120 Hb_004291_040--Hb_000243_120 Hb_001564_070 Hb_001564_070 Hb_004291_040--Hb_001564_070 Hb_106890_010 Hb_106890_010 Hb_004291_040--Hb_106890_010 Hb_000009_030 Hb_000009_030 Hb_004291_040--Hb_000009_030 Hb_028960_030 Hb_028960_030 Hb_004291_040--Hb_028960_030 Hb_000270_170 Hb_000270_170 Hb_027402_130--Hb_000270_170 Hb_027402_130--Hb_000243_120 Hb_005260_030 Hb_005260_030 Hb_027402_130--Hb_005260_030 Hb_027402_130--Hb_106890_010 Hb_003490_060 Hb_003490_060 Hb_027402_130--Hb_003490_060 Hb_068804_090 Hb_068804_090 Hb_000243_120--Hb_068804_090 Hb_009158_060 Hb_009158_060 Hb_000243_120--Hb_009158_060 Hb_030736_040 Hb_030736_040 Hb_000243_120--Hb_030736_040 Hb_000243_120--Hb_106890_010 Hb_003355_010 Hb_003355_010 Hb_000243_120--Hb_003355_010 Hb_013749_050 Hb_013749_050 Hb_000243_120--Hb_013749_050 Hb_001504_060 Hb_001504_060 Hb_001564_070--Hb_001504_060 Hb_000125_180 Hb_000125_180 Hb_001564_070--Hb_000125_180 Hb_000922_260 Hb_000922_260 Hb_001564_070--Hb_000922_260 Hb_005854_040 Hb_005854_040 Hb_001564_070--Hb_005854_040 Hb_012325_010 Hb_012325_010 Hb_001564_070--Hb_012325_010 Hb_106890_010--Hb_003355_010 Hb_106890_010--Hb_030736_040 Hb_106890_010--Hb_003490_060 Hb_005571_010 Hb_005571_010 Hb_106890_010--Hb_005571_010 Hb_007741_120 Hb_007741_120 Hb_106890_010--Hb_007741_120 Hb_019654_020 Hb_019654_020 Hb_106890_010--Hb_019654_020 Hb_000976_110 Hb_000976_110 Hb_000009_030--Hb_000976_110 Hb_005489_040 Hb_005489_040 Hb_000009_030--Hb_005489_040 Hb_000318_150 Hb_000318_150 Hb_000009_030--Hb_000318_150 Hb_000787_200 Hb_000787_200 Hb_000009_030--Hb_000787_200 Hb_160608_010 Hb_160608_010 Hb_000009_030--Hb_160608_010 Hb_001587_030 Hb_001587_030 Hb_000009_030--Hb_001587_030 Hb_011224_160 Hb_011224_160 Hb_028960_030--Hb_011224_160 Hb_003683_010 Hb_003683_010 Hb_028960_030--Hb_003683_010 Hb_000979_220 Hb_000979_220 Hb_028960_030--Hb_000979_220 Hb_011671_270 Hb_011671_270 Hb_028960_030--Hb_011671_270 Hb_011674_040 Hb_011674_040 Hb_028960_030--Hb_011674_040 Hb_021576_010 Hb_021576_010 Hb_028960_030--Hb_021576_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.11936 5.74987 9.501 4.54382 3.2061 2.24976
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.81152 4.15011 4.00492 12.3869 14.2167

CAGE analysis