Hb_000243_120

Information

Type -
Description -
Location Contig243: 70378-89698
Sequence    

Annotation

kegg
ID pop:POPTR_0005s12040g
description hypothetical protein
nr
ID XP_012078398.1
description PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
swissprot
ID Q14149
description MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3
trembl
ID A0A067KLJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13667 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25353: 73503-82312 , PASA_asmbl_25354: 76510-82312 , PASA_asmbl_25355: 76462-85600 , PASA_asmbl_25356: 88165-88664 , PASA_asmbl_25359: 84664-89102 , PASA_asmbl_25360: 84628-89667
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000243_120 0.0 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
2 Hb_068804_090 0.0642320929 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
3 Hb_009158_060 0.0755649052 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
4 Hb_030736_040 0.0796979438 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
5 Hb_106890_010 0.083731651 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
6 Hb_003355_010 0.0843727729 - - Heat shock 70 kDa protein, putative [Ricinus communis]
7 Hb_013749_050 0.0845678855 - - PREDICTED: uncharacterized protein LOC105647765 isoform X2 [Jatropha curcas]
8 Hb_001504_060 0.0847331761 - - PREDICTED: nuclear pore complex protein NUP93A-like [Jatropha curcas]
9 Hb_000748_090 0.0857393478 - - glucose inhibited division protein A, putative [Ricinus communis]
10 Hb_004705_160 0.0874116019 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
11 Hb_007012_030 0.0897524562 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Jatropha curcas]
12 Hb_001117_110 0.0901742255 - - PREDICTED: dynamin-2A [Jatropha curcas]
13 Hb_000862_100 0.0914134495 - - PREDICTED: plastid division protein CDP1, chloroplastic [Jatropha curcas]
14 Hb_027402_130 0.0940155171 - - malate dehydrogenase, putative [Ricinus communis]
15 Hb_003490_060 0.0951850102 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2 [Sesamum indicum]
16 Hb_005305_130 0.0960495009 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
17 Hb_138585_030 0.0969034978 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
18 Hb_001488_020 0.097088266 - - PREDICTED: probable mitochondrial-processing peptidase subunit beta [Jatropha curcas]
19 Hb_001832_200 0.0972259377 - - PREDICTED: PCI domain-containing protein 2 isoform X1 [Jatropha curcas]
20 Hb_000510_190 0.0977649684 - - glutathione reductase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000243_120 Hb_000243_120 Hb_068804_090 Hb_068804_090 Hb_000243_120--Hb_068804_090 Hb_009158_060 Hb_009158_060 Hb_000243_120--Hb_009158_060 Hb_030736_040 Hb_030736_040 Hb_000243_120--Hb_030736_040 Hb_106890_010 Hb_106890_010 Hb_000243_120--Hb_106890_010 Hb_003355_010 Hb_003355_010 Hb_000243_120--Hb_003355_010 Hb_013749_050 Hb_013749_050 Hb_000243_120--Hb_013749_050 Hb_000748_090 Hb_000748_090 Hb_068804_090--Hb_000748_090 Hb_068804_090--Hb_013749_050 Hb_007012_030 Hb_007012_030 Hb_068804_090--Hb_007012_030 Hb_068804_090--Hb_030736_040 Hb_004629_030 Hb_004629_030 Hb_068804_090--Hb_004629_030 Hb_005305_130 Hb_005305_130 Hb_009158_060--Hb_005305_130 Hb_160608_010 Hb_160608_010 Hb_009158_060--Hb_160608_010 Hb_003661_010 Hb_003661_010 Hb_009158_060--Hb_003661_010 Hb_000172_360 Hb_000172_360 Hb_009158_060--Hb_000172_360 Hb_000030_140 Hb_000030_140 Hb_009158_060--Hb_000030_140 Hb_008054_040 Hb_008054_040 Hb_009158_060--Hb_008054_040 Hb_001117_110 Hb_001117_110 Hb_030736_040--Hb_001117_110 Hb_030736_040--Hb_106890_010 Hb_055690_010 Hb_055690_010 Hb_030736_040--Hb_055690_010 Hb_030736_040--Hb_003355_010 Hb_008705_020 Hb_008705_020 Hb_030736_040--Hb_008705_020 Hb_106890_010--Hb_003355_010 Hb_003490_060 Hb_003490_060 Hb_106890_010--Hb_003490_060 Hb_005571_010 Hb_005571_010 Hb_106890_010--Hb_005571_010 Hb_007741_120 Hb_007741_120 Hb_106890_010--Hb_007741_120 Hb_019654_020 Hb_019654_020 Hb_106890_010--Hb_019654_020 Hb_003355_010--Hb_005571_010 Hb_000496_130 Hb_000496_130 Hb_003355_010--Hb_000496_130 Hb_003355_010--Hb_007741_120 Hb_003355_010--Hb_003490_060 Hb_002973_110 Hb_002973_110 Hb_013749_050--Hb_002973_110 Hb_004111_030 Hb_004111_030 Hb_013749_050--Hb_004111_030 Hb_013749_050--Hb_030736_040 Hb_000617_250 Hb_000617_250 Hb_013749_050--Hb_000617_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.87158 9.1295 16.4241 9.19423 5.97149 3.26849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.39473 4.72395 5.34499 10.6625 18.6286

CAGE analysis