Hb_000748_090

Information

Type -
Description -
Location Contig748: 121553-136373
Sequence    

Annotation

kegg
ID rcu:RCOM_1189220
description glucose inhibited division protein A, putative
nr
ID XP_002516320.1
description glucose inhibited division protein A, putative [Ricinus communis]
swissprot
ID Q8DLF8
description tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG OS=Thermosynechococcus elongatus (strain BP-1) GN=mnmG PE=3 SV=1
trembl
ID B9RRF1
description Glucose inhibited division protein A, putative OS=Ricinus communis GN=RCOM_1189220 PE=4 SV=1
Gene Ontology
ID GO:0050660
description glucose inhibited division protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56742: 121860-130487 , PASA_asmbl_56743: 130551-130822 , PASA_asmbl_56744: 131971-136369
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000748_090 0.0 - - glucose inhibited division protein A, putative [Ricinus communis]
2 Hb_007012_030 0.0377338711 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Jatropha curcas]
3 Hb_002600_070 0.051511224 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
4 Hb_068804_090 0.053820734 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
5 Hb_004324_360 0.0698192061 - - PREDICTED: uncharacterized protein LOC105650600 isoform X1 [Jatropha curcas]
6 Hb_021596_020 0.0744782727 - - hypothetical protein JCGZ_02034 [Jatropha curcas]
7 Hb_000482_050 0.0756506496 - - PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Jatropha curcas]
8 Hb_004705_160 0.0758076964 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
9 Hb_000788_030 0.0761594655 - - PREDICTED: dynamin-2A [Jatropha curcas]
10 Hb_004629_030 0.0764394383 - - ABC transporter family protein [Hevea brasiliensis]
11 Hb_114310_070 0.0782819908 - - GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis]
12 Hb_000862_100 0.0789394288 - - PREDICTED: plastid division protein CDP1, chloroplastic [Jatropha curcas]
13 Hb_001396_020 0.0796083408 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
14 Hb_009158_060 0.0817565453 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
15 Hb_005305_130 0.0822714408 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
16 Hb_002684_020 0.0835075137 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
17 Hb_004774_090 0.084107849 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
18 Hb_000108_020 0.0848262588 - - hypothetical protein POPTR_0019s02430g [Populus trichocarpa]
19 Hb_068079_010 0.0853400667 - - -
20 Hb_000243_120 0.0857393478 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000748_090 Hb_000748_090 Hb_007012_030 Hb_007012_030 Hb_000748_090--Hb_007012_030 Hb_002600_070 Hb_002600_070 Hb_000748_090--Hb_002600_070 Hb_068804_090 Hb_068804_090 Hb_000748_090--Hb_068804_090 Hb_004324_360 Hb_004324_360 Hb_000748_090--Hb_004324_360 Hb_021596_020 Hb_021596_020 Hb_000748_090--Hb_021596_020 Hb_000482_050 Hb_000482_050 Hb_000748_090--Hb_000482_050 Hb_007012_030--Hb_002600_070 Hb_007012_030--Hb_068804_090 Hb_000617_250 Hb_000617_250 Hb_007012_030--Hb_000617_250 Hb_007012_030--Hb_000482_050 Hb_007012_030--Hb_004324_360 Hb_000771_170 Hb_000771_170 Hb_002600_070--Hb_000771_170 Hb_001277_340 Hb_001277_340 Hb_002600_070--Hb_001277_340 Hb_002600_070--Hb_000482_050 Hb_009158_060 Hb_009158_060 Hb_002600_070--Hb_009158_060 Hb_013749_050 Hb_013749_050 Hb_068804_090--Hb_013749_050 Hb_000243_120 Hb_000243_120 Hb_068804_090--Hb_000243_120 Hb_030736_040 Hb_030736_040 Hb_068804_090--Hb_030736_040 Hb_004629_030 Hb_004629_030 Hb_068804_090--Hb_004629_030 Hb_002684_020 Hb_002684_020 Hb_004324_360--Hb_002684_020 Hb_000975_210 Hb_000975_210 Hb_004324_360--Hb_000975_210 Hb_000788_030 Hb_000788_030 Hb_004324_360--Hb_000788_030 Hb_001488_020 Hb_001488_020 Hb_004324_360--Hb_001488_020 Hb_000476_060 Hb_000476_060 Hb_004324_360--Hb_000476_060 Hb_033312_040 Hb_033312_040 Hb_004324_360--Hb_033312_040 Hb_001504_010 Hb_001504_010 Hb_021596_020--Hb_001504_010 Hb_021596_020--Hb_002684_020 Hb_016448_010 Hb_016448_010 Hb_021596_020--Hb_016448_010 Hb_006438_020 Hb_006438_020 Hb_021596_020--Hb_006438_020 Hb_012633_050 Hb_012633_050 Hb_021596_020--Hb_012633_050 Hb_002828_060 Hb_002828_060 Hb_000482_050--Hb_002828_060 Hb_000482_050--Hb_004629_030 Hb_001396_020 Hb_001396_020 Hb_000482_050--Hb_001396_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.48394 4.90251 7.74091 4.95367 2.29202 2.89974
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.95367 2.38553 2.30118 3.60387 9.19261

CAGE analysis