Hb_000496_130

Information

Type -
Description -
Location Contig496: 99078-102537
Sequence    

Annotation

kegg
ID pop:POPTR_0002s04380g
description POPTRDRAFT_754215; hypothetical protein
nr
ID XP_012092086.1
description PREDICTED: fructokinase-1 [Jatropha curcas]
swissprot
ID Q63B75
description 5-dehydro-2-deoxygluconokinase 1 OS=Bacillus cereus (strain ZK / E33L) GN=iolC1 PE=3 SV=1
trembl
ID A0A067JP89
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21820 PE=4 SV=1
Gene Ontology
ID GO:0005634
description fructokinase-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45476: 99192-99812 , PASA_asmbl_45477: 99403-100669 , PASA_asmbl_45478: 101037-102473
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000496_130 0.0 - - PREDICTED: fructokinase-1 [Jatropha curcas]
2 Hb_003355_010 0.0747614421 - - Heat shock 70 kDa protein, putative [Ricinus communis]
3 Hb_001143_100 0.0851252786 - - PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
4 Hb_007943_150 0.0897975254 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
5 Hb_025194_090 0.0923180934 - - coproporphyrinogen III oxidase, putative [Ricinus communis]
6 Hb_004710_020 0.0954498884 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
7 Hb_000510_190 0.0968558604 - - glutathione reductase [Hevea brasiliensis]
8 Hb_001390_100 0.0971545481 - - PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Jatropha curcas]
9 Hb_000579_040 0.0987122622 - - PREDICTED: putative GTP-binding protein 6 [Jatropha curcas]
10 Hb_032631_070 0.0996169899 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
11 Hb_004111_030 0.099674713 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
12 Hb_101334_020 0.1018941515 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
13 Hb_000265_070 0.1021242386 - - glucose-1-phosphate denylyltransferase small subunit [Hevea brasiliensis]
14 Hb_001425_010 0.1029434084 - - sugar transporter, putative [Ricinus communis]
15 Hb_106890_010 0.1031290153 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
16 Hb_000230_530 0.1034660013 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000085_070 0.104786118 - - PREDICTED: trigger factor-like protein TIG, Chloroplastic isoform X1 [Jatropha curcas]
18 Hb_006816_010 0.1085177333 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003490_060 0.1085738621 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2 [Sesamum indicum]
20 Hb_002828_060 0.1108744937 - - PREDICTED: probable phytol kinase 3, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000496_130 Hb_000496_130 Hb_003355_010 Hb_003355_010 Hb_000496_130--Hb_003355_010 Hb_001143_100 Hb_001143_100 Hb_000496_130--Hb_001143_100 Hb_007943_150 Hb_007943_150 Hb_000496_130--Hb_007943_150 Hb_025194_090 Hb_025194_090 Hb_000496_130--Hb_025194_090 Hb_004710_020 Hb_004710_020 Hb_000496_130--Hb_004710_020 Hb_000510_190 Hb_000510_190 Hb_000496_130--Hb_000510_190 Hb_106890_010 Hb_106890_010 Hb_003355_010--Hb_106890_010 Hb_030736_040 Hb_030736_040 Hb_003355_010--Hb_030736_040 Hb_005571_010 Hb_005571_010 Hb_003355_010--Hb_005571_010 Hb_007741_120 Hb_007741_120 Hb_003355_010--Hb_007741_120 Hb_003490_060 Hb_003490_060 Hb_003355_010--Hb_003490_060 Hb_000579_040 Hb_000579_040 Hb_001143_100--Hb_000579_040 Hb_001143_100--Hb_000510_190 Hb_032631_070 Hb_032631_070 Hb_001143_100--Hb_032631_070 Hb_001143_100--Hb_003355_010 Hb_008375_010 Hb_008375_010 Hb_001143_100--Hb_008375_010 Hb_001434_020 Hb_001434_020 Hb_007943_150--Hb_001434_020 Hb_002392_020 Hb_002392_020 Hb_007943_150--Hb_002392_020 Hb_000265_070 Hb_000265_070 Hb_007943_150--Hb_000265_070 Hb_005588_100 Hb_005588_100 Hb_007943_150--Hb_005588_100 Hb_000696_190 Hb_000696_190 Hb_007943_150--Hb_000696_190 Hb_025194_090--Hb_000579_040 Hb_003029_020 Hb_003029_020 Hb_025194_090--Hb_003029_020 Hb_004502_010 Hb_004502_010 Hb_025194_090--Hb_004502_010 Hb_004629_030 Hb_004629_030 Hb_025194_090--Hb_004629_030 Hb_002928_030 Hb_002928_030 Hb_025194_090--Hb_002928_030 Hb_000085_070 Hb_000085_070 Hb_004710_020--Hb_000085_070 Hb_000454_100 Hb_000454_100 Hb_004710_020--Hb_000454_100 Hb_002828_060 Hb_002828_060 Hb_004710_020--Hb_002828_060 Hb_006006_060 Hb_006006_060 Hb_004710_020--Hb_006006_060 Hb_001348_090 Hb_001348_090 Hb_004710_020--Hb_001348_090 Hb_000487_370 Hb_000487_370 Hb_000510_190--Hb_000487_370 Hb_000414_080 Hb_000414_080 Hb_000510_190--Hb_000414_080 Hb_000510_190--Hb_002828_060 Hb_002249_080 Hb_002249_080 Hb_000510_190--Hb_002249_080 Hb_009296_020 Hb_009296_020 Hb_000510_190--Hb_009296_020 Hb_000510_190--Hb_003490_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.07085 1.76612 6.51014 3.78047 1.4231 1.61018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.924794 1.51425 1.15305 4.60468 8.66145

CAGE analysis