Hb_004126_030

Information

Type -
Description -
Location Contig4126: 48244-50488
Sequence    

Annotation

kegg
ID rcu:RCOM_1674640
description kinase, putative (EC:2.7.10.2)
nr
ID XP_002509468.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9S9U1
description L-type lectin-domain containing receptor kinase VII.1 OS=Arabidopsis thaliana GN=LECRK71 PE=2 SV=1
trembl
ID B9RBD4
description Kinase, putative OS=Ricinus communis GN=RCOM_1674640 PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004126_030 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000847_010 0.0827039548 - - PREDICTED: uncharacterized protein LOC102608064 [Citrus sinensis]
3 Hb_000800_010 0.1537716745 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
4 Hb_002027_170 0.1679230157 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3 [Jatropha curcas]
5 Hb_002973_030 0.1679906891 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
6 Hb_000979_160 0.1727416315 - - hypothetical protein RCOM_0629030 [Ricinus communis]
7 Hb_019654_110 0.1757632787 - - PREDICTED: F-box protein SKIP23-like [Jatropha curcas]
8 Hb_004007_200 0.1784350256 - - PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
9 Hb_002609_130 0.1797653762 - - PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
10 Hb_000416_060 0.1803865869 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
11 Hb_009222_080 0.180906337 - - RING-H2 finger protein ATL2J, putative [Ricinus communis]
12 Hb_013405_100 0.1826761803 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
13 Hb_002685_220 0.1858203001 - - PREDICTED: cationic amino acid transporter 4, vacuolar-like isoform X1 [Jatropha curcas]
14 Hb_000386_050 0.1874118344 - - PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Jatropha curcas]
15 Hb_002217_070 0.1874562787 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
16 Hb_090361_010 0.188090798 - - amino acid transporter, putative [Ricinus communis]
17 Hb_005155_010 0.1882251288 - - amino acid transporter, putative [Ricinus communis]
18 Hb_001951_230 0.1907771165 - - PREDICTED: phytochrome E isoform X2 [Jatropha curcas]
19 Hb_000256_220 0.1909809991 - - PREDICTED: flotillin-like protein 4 [Jatropha curcas]
20 Hb_007163_040 0.1929023777 - - PREDICTED: uncharacterized protein At5g65660 [Vitis vinifera]

Gene co-expression network

sample Hb_004126_030 Hb_004126_030 Hb_000847_010 Hb_000847_010 Hb_004126_030--Hb_000847_010 Hb_000800_010 Hb_000800_010 Hb_004126_030--Hb_000800_010 Hb_002027_170 Hb_002027_170 Hb_004126_030--Hb_002027_170 Hb_002973_030 Hb_002973_030 Hb_004126_030--Hb_002973_030 Hb_000979_160 Hb_000979_160 Hb_004126_030--Hb_000979_160 Hb_019654_110 Hb_019654_110 Hb_004126_030--Hb_019654_110 Hb_002609_130 Hb_002609_130 Hb_000847_010--Hb_002609_130 Hb_002217_070 Hb_002217_070 Hb_000847_010--Hb_002217_070 Hb_000847_010--Hb_000800_010 Hb_005305_030 Hb_005305_030 Hb_000847_010--Hb_005305_030 Hb_013405_100 Hb_013405_100 Hb_000847_010--Hb_013405_100 Hb_000416_060 Hb_000416_060 Hb_000800_010--Hb_000416_060 Hb_005588_120 Hb_005588_120 Hb_000800_010--Hb_005588_120 Hb_006414_010 Hb_006414_010 Hb_000800_010--Hb_006414_010 Hb_004129_010 Hb_004129_010 Hb_000800_010--Hb_004129_010 Hb_001699_170 Hb_001699_170 Hb_000800_010--Hb_001699_170 Hb_132840_030 Hb_132840_030 Hb_000800_010--Hb_132840_030 Hb_001049_160 Hb_001049_160 Hb_002027_170--Hb_001049_160 Hb_005054_170 Hb_005054_170 Hb_002027_170--Hb_005054_170 Hb_000056_280 Hb_000056_280 Hb_002027_170--Hb_000056_280 Hb_001318_140 Hb_001318_140 Hb_002027_170--Hb_001318_140 Hb_065525_010 Hb_065525_010 Hb_002027_170--Hb_065525_010 Hb_000836_600 Hb_000836_600 Hb_002027_170--Hb_000836_600 Hb_002004_010 Hb_002004_010 Hb_002973_030--Hb_002004_010 Hb_002066_010 Hb_002066_010 Hb_002973_030--Hb_002066_010 Hb_000479_060 Hb_000479_060 Hb_002973_030--Hb_000479_060 Hb_000753_120 Hb_000753_120 Hb_002973_030--Hb_000753_120 Hb_000270_750 Hb_000270_750 Hb_002973_030--Hb_000270_750 Hb_002973_030--Hb_013405_100 Hb_001976_020 Hb_001976_020 Hb_000979_160--Hb_001976_020 Hb_000959_120 Hb_000959_120 Hb_000979_160--Hb_000959_120 Hb_007027_010 Hb_007027_010 Hb_000979_160--Hb_007027_010 Hb_002097_080 Hb_002097_080 Hb_000979_160--Hb_002097_080 Hb_001247_270 Hb_001247_270 Hb_000979_160--Hb_001247_270 Hb_003006_080 Hb_003006_080 Hb_000979_160--Hb_003006_080 Hb_019654_110--Hb_000416_060 Hb_029584_100 Hb_029584_100 Hb_019654_110--Hb_029584_100 Hb_019654_110--Hb_003006_080 Hb_002151_100 Hb_002151_100 Hb_019654_110--Hb_002151_100 Hb_019654_110--Hb_005588_120 Hb_001235_130 Hb_001235_130 Hb_019654_110--Hb_001235_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0914268 12.8559 1.92691 11.2923 0.450507 0.834529
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.563119 1.80518 0.561194 4.70429 11.7809

CAGE analysis