Hb_002097_080

Information

Type -
Description -
Location Contig2097: 181079-189006
Sequence    

Annotation

kegg
ID rcu:RCOM_1353360
description phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68)
nr
ID XP_002519450.1
description phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]
swissprot
ID Q8L850
description Phosphatidylinositol 4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=2
trembl
ID B9S0D1
description Phosphatidylinositol-4-phosphate 5-kinase, putative OS=Ricinus communis GN=RCOM_1353360 PE=4 SV=1
Gene Ontology
ID GO:0005829
description phosphatidylinositol 4-phosphate 5-kinase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21683: 180963-188965
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002097_080 0.0 - - phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]
2 Hb_002685_220 0.1080066131 - - PREDICTED: cationic amino acid transporter 4, vacuolar-like isoform X1 [Jatropha curcas]
3 Hb_001976_020 0.110361031 - - conserved hypothetical protein [Ricinus communis]
4 Hb_014361_040 0.1117665575 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
5 Hb_098795_030 0.113027725 - - PREDICTED: metal tolerance protein 1-like [Vitis vinifera]
6 Hb_002685_160 0.1180634117 - - leucine-rich repeat protein, putative [Ricinus communis]
7 Hb_000028_580 0.1188488807 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
8 Hb_001728_130 0.1257094636 - - alcohol dehydrogenase, putative [Ricinus communis]
9 Hb_152980_020 0.1270828171 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
10 Hb_002740_100 0.1285226417 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
11 Hb_009222_080 0.1327302556 - - RING-H2 finger protein ATL2J, putative [Ricinus communis]
12 Hb_000979_160 0.1334790297 - - hypothetical protein RCOM_0629030 [Ricinus communis]
13 Hb_002495_030 0.1367520845 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
14 Hb_006615_230 0.1385546966 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
15 Hb_072398_010 0.1386649114 - - pepsin A, putative [Ricinus communis]
16 Hb_000959_120 0.1427300798 - - PREDICTED: protein BRASSINOSTEROID INSENSITIVE 1 [Jatropha curcas]
17 Hb_134014_010 0.1453809321 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
18 Hb_005545_110 0.1467848212 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
19 Hb_003001_130 0.1480251215 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000107_550 0.1487830204 - - PREDICTED: monosaccharide-sensing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_002097_080 Hb_002097_080 Hb_002685_220 Hb_002685_220 Hb_002097_080--Hb_002685_220 Hb_001976_020 Hb_001976_020 Hb_002097_080--Hb_001976_020 Hb_014361_040 Hb_014361_040 Hb_002097_080--Hb_014361_040 Hb_098795_030 Hb_098795_030 Hb_002097_080--Hb_098795_030 Hb_002685_160 Hb_002685_160 Hb_002097_080--Hb_002685_160 Hb_000028_580 Hb_000028_580 Hb_002097_080--Hb_000028_580 Hb_009222_080 Hb_009222_080 Hb_002685_220--Hb_009222_080 Hb_000107_550 Hb_000107_550 Hb_002685_220--Hb_000107_550 Hb_002740_100 Hb_002740_100 Hb_002685_220--Hb_002740_100 Hb_002495_030 Hb_002495_030 Hb_002685_220--Hb_002495_030 Hb_002685_220--Hb_001976_020 Hb_000979_160 Hb_000979_160 Hb_001976_020--Hb_000979_160 Hb_001976_020--Hb_098795_030 Hb_000959_120 Hb_000959_120 Hb_001976_020--Hb_000959_120 Hb_007590_100 Hb_007590_100 Hb_001976_020--Hb_007590_100 Hb_000162_070 Hb_000162_070 Hb_014361_040--Hb_000162_070 Hb_026144_040 Hb_026144_040 Hb_014361_040--Hb_026144_040 Hb_007237_080 Hb_007237_080 Hb_014361_040--Hb_007237_080 Hb_000045_080 Hb_000045_080 Hb_014361_040--Hb_000045_080 Hb_001728_130 Hb_001728_130 Hb_014361_040--Hb_001728_130 Hb_006615_230 Hb_006615_230 Hb_098795_030--Hb_006615_230 Hb_098795_030--Hb_002495_030 Hb_003470_110 Hb_003470_110 Hb_098795_030--Hb_003470_110 Hb_098795_030--Hb_002685_220 Hb_000685_020 Hb_000685_020 Hb_002685_160--Hb_000685_020 Hb_000230_360 Hb_000230_360 Hb_002685_160--Hb_000230_360 Hb_152980_020 Hb_152980_020 Hb_002685_160--Hb_152980_020 Hb_003656_090 Hb_003656_090 Hb_002685_160--Hb_003656_090 Hb_005724_040 Hb_005724_040 Hb_002685_160--Hb_005724_040 Hb_000028_550 Hb_000028_550 Hb_000028_580--Hb_000028_550 Hb_004449_090 Hb_004449_090 Hb_000028_580--Hb_004449_090 Hb_000479_060 Hb_000479_060 Hb_000028_580--Hb_000479_060 Hb_154038_040 Hb_154038_040 Hb_000028_580--Hb_154038_040 Hb_135720_010 Hb_135720_010 Hb_000028_580--Hb_135720_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.08531 16.449 9.85407 43.0274 1.05799 2.10116
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.6121 0.470208 0.329051 12.9914 22.5098

CAGE analysis