Hb_135720_010

Information

Type -
Description -
Location Contig135720: 34-1501
Sequence    

Annotation

kegg
ID rcu:RCOM_0793510
description aldo-keto reductase, putative (EC:2.3.1.170)
nr
ID KDP26699.1
description hypothetical protein JCGZ_17857 [Jatropha curcas]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID A0A067K4K3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17857 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09950: 686-1399
cDNA
(Sanger)
(ID:Location)		 005_A19.ab1: 674-1399 , 053_M12.ab1: 421-1399

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135720_010 0.0 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
2 Hb_001728_130 0.1173187152 - - alcohol dehydrogenase, putative [Ricinus communis]
3 Hb_007625_030 0.1267914593 - - unknown [Medicago truncatula]
4 Hb_029866_080 0.1269884146 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
5 Hb_032260_130 0.1292560543 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
6 Hb_000325_010 0.131025316 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
7 Hb_139461_010 0.1322334748 desease resistance Gene Name: NB-ARC Cc-nbs-lrr resistance protein, putative [Theobroma cacao]
8 Hb_000181_260 0.1379831918 - - PREDICTED: uncharacterized protein LOC105139156 [Populus euphratica]
9 Hb_000856_250 0.138726085 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
10 Hb_000115_290 0.1395274415 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
11 Hb_000069_630 0.1396411511 - - hypothetical protein [Hevea brasiliensis]
12 Hb_010417_090 0.1406921322 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
13 Hb_007632_130 0.1408790663 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
14 Hb_001564_090 0.1432144607 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002025_050 0.1436343453 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002236_010 0.1449963851 - - PREDICTED: bidirectional sugar transporter SWEET4 [Jatropha curcas]
17 Hb_002811_110 0.1451066942 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
18 Hb_000070_070 0.1501318807 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
19 Hb_000032_340 0.1503622963 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
20 Hb_000028_580 0.1531827885 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]

Gene co-expression network

sample Hb_135720_010 Hb_135720_010 Hb_001728_130 Hb_001728_130 Hb_135720_010--Hb_001728_130 Hb_007625_030 Hb_007625_030 Hb_135720_010--Hb_007625_030 Hb_029866_080 Hb_029866_080 Hb_135720_010--Hb_029866_080 Hb_032260_130 Hb_032260_130 Hb_135720_010--Hb_032260_130 Hb_000325_010 Hb_000325_010 Hb_135720_010--Hb_000325_010 Hb_139461_010 Hb_139461_010 Hb_135720_010--Hb_139461_010 Hb_000095_070 Hb_000095_070 Hb_001728_130--Hb_000095_070 Hb_014361_040 Hb_014361_040 Hb_001728_130--Hb_014361_040 Hb_005545_110 Hb_005545_110 Hb_001728_130--Hb_005545_110 Hb_164117_010 Hb_164117_010 Hb_001728_130--Hb_164117_010 Hb_073808_010 Hb_073808_010 Hb_001728_130--Hb_073808_010 Hb_002236_010 Hb_002236_010 Hb_007625_030--Hb_002236_010 Hb_002553_070 Hb_002553_070 Hb_007625_030--Hb_002553_070 Hb_023956_010 Hb_023956_010 Hb_007625_030--Hb_023956_010 Hb_009627_020 Hb_009627_020 Hb_007625_030--Hb_009627_020 Hb_004079_100 Hb_004079_100 Hb_007625_030--Hb_004079_100 Hb_000454_200 Hb_000454_200 Hb_007625_030--Hb_000454_200 Hb_001564_090 Hb_001564_090 Hb_029866_080--Hb_001564_090 Hb_002289_110 Hb_002289_110 Hb_029866_080--Hb_002289_110 Hb_012787_050 Hb_012787_050 Hb_029866_080--Hb_012787_050 Hb_000070_070 Hb_000070_070 Hb_029866_080--Hb_000070_070 Hb_005489_120 Hb_005489_120 Hb_029866_080--Hb_005489_120 Hb_005333_120 Hb_005333_120 Hb_029866_080--Hb_005333_120 Hb_032260_130--Hb_164117_010 Hb_004893_010 Hb_004893_010 Hb_032260_130--Hb_004893_010 Hb_000115_290 Hb_000115_290 Hb_032260_130--Hb_000115_290 Hb_116194_010 Hb_116194_010 Hb_032260_130--Hb_116194_010 Hb_007632_130 Hb_007632_130 Hb_032260_130--Hb_007632_130 Hb_002374_520 Hb_002374_520 Hb_032260_130--Hb_002374_520 Hb_002477_080 Hb_002477_080 Hb_000325_010--Hb_002477_080 Hb_000816_050 Hb_000816_050 Hb_000325_010--Hb_000816_050 Hb_000325_010--Hb_014361_040 Hb_008092_020 Hb_008092_020 Hb_000325_010--Hb_008092_020 Hb_000325_010--Hb_001728_130 Hb_008021_040 Hb_008021_040 Hb_139461_010--Hb_008021_040 Hb_000181_260 Hb_000181_260 Hb_139461_010--Hb_000181_260 Hb_043789_010 Hb_043789_010 Hb_139461_010--Hb_043789_010 Hb_002811_110 Hb_002811_110 Hb_139461_010--Hb_002811_110 Hb_009838_120 Hb_009838_120 Hb_139461_010--Hb_009838_120 Hb_001048_070 Hb_001048_070 Hb_139461_010--Hb_001048_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.95219 39.9217 14.5637 104.377 2.36879 0.723321
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.46828 0.956956 0 50.192 24.9552

CAGE analysis