Hb_000959_120

Information

Type -
Description -
Location Contig959: 118766-122344
Sequence    

Annotation

kegg
ID rcu:RCOM_0478150
description serine/threonine-protein kinase bri1, putative (EC:2.7.11.25 3.1.3.16)
nr
ID XP_012075271.1
description PREDICTED: protein BRASSINOSTEROID INSENSITIVE 1 [Jatropha curcas]
swissprot
ID Q8L899
description Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1
trembl
ID A0A067KGQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09441 PE=4 SV=1
Gene Ontology
ID GO:0005622
description protein brassinosteroid insensitive 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000959_120 0.0 - - PREDICTED: protein BRASSINOSTEROID INSENSITIVE 1 [Jatropha curcas]
2 Hb_000095_070 0.1122690625 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001247_270 0.1136694678 - - PREDICTED: probable L-cysteine desulfhydrase, chloroplastic [Jatropha curcas]
4 Hb_000979_160 0.1142910825 - - hypothetical protein RCOM_0629030 [Ricinus communis]
5 Hb_001728_130 0.1285285499 - - alcohol dehydrogenase, putative [Ricinus communis]
6 Hb_001976_020 0.1320730194 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004462_030 0.1324395303 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
8 Hb_000970_020 0.1328547615 - - hypothetical protein POPTR_0005s19050g [Populus trichocarpa]
9 Hb_187959_010 0.135679535 - - hypothetical protein JCGZ_12266 [Jatropha curcas]
10 Hb_002671_060 0.1359614286 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
11 Hb_001159_170 0.1359986403 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
12 Hb_073808_010 0.1368462301 desease resistance Gene Name: DUF594 ATP binding protein, putative [Ricinus communis]
13 Hb_000003_020 0.1375248405 - - PREDICTED: uncharacterized protein LOC105631161 [Jatropha curcas]
14 Hb_002814_050 0.1405884862 - - PREDICTED: sugar carrier protein A [Jatropha curcas]
15 Hb_007590_100 0.1427196368 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
16 Hb_002097_080 0.1427300798 - - phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]
17 Hb_098795_030 0.145917071 - - PREDICTED: metal tolerance protein 1-like [Vitis vinifera]
18 Hb_002685_220 0.147022127 - - PREDICTED: cationic amino acid transporter 4, vacuolar-like isoform X1 [Jatropha curcas]
19 Hb_002518_180 0.1502845603 - - hypothetical protein POPTR_0001s25460g [Populus trichocarpa]
20 Hb_060198_010 0.1502921253 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000959_120 Hb_000959_120 Hb_000095_070 Hb_000095_070 Hb_000959_120--Hb_000095_070 Hb_001247_270 Hb_001247_270 Hb_000959_120--Hb_001247_270 Hb_000979_160 Hb_000979_160 Hb_000959_120--Hb_000979_160 Hb_001728_130 Hb_001728_130 Hb_000959_120--Hb_001728_130 Hb_001976_020 Hb_001976_020 Hb_000959_120--Hb_001976_020 Hb_004462_030 Hb_004462_030 Hb_000959_120--Hb_004462_030 Hb_002814_050 Hb_002814_050 Hb_000095_070--Hb_002814_050 Hb_060198_010 Hb_060198_010 Hb_000095_070--Hb_060198_010 Hb_000347_420 Hb_000347_420 Hb_000095_070--Hb_000347_420 Hb_000095_070--Hb_001728_130 Hb_004307_070 Hb_004307_070 Hb_000095_070--Hb_004307_070 Hb_029584_100 Hb_029584_100 Hb_001247_270--Hb_029584_100 Hb_009535_030 Hb_009535_030 Hb_001247_270--Hb_009535_030 Hb_003006_080 Hb_003006_080 Hb_001247_270--Hb_003006_080 Hb_004522_030 Hb_004522_030 Hb_001247_270--Hb_004522_030 Hb_073808_010 Hb_073808_010 Hb_001247_270--Hb_073808_010 Hb_000979_160--Hb_001976_020 Hb_007027_010 Hb_007027_010 Hb_000979_160--Hb_007027_010 Hb_002097_080 Hb_002097_080 Hb_000979_160--Hb_002097_080 Hb_000979_160--Hb_001247_270 Hb_000979_160--Hb_003006_080 Hb_014361_040 Hb_014361_040 Hb_001728_130--Hb_014361_040 Hb_135720_010 Hb_135720_010 Hb_001728_130--Hb_135720_010 Hb_005545_110 Hb_005545_110 Hb_001728_130--Hb_005545_110 Hb_164117_010 Hb_164117_010 Hb_001728_130--Hb_164117_010 Hb_001728_130--Hb_073808_010 Hb_001976_020--Hb_002097_080 Hb_098795_030 Hb_098795_030 Hb_001976_020--Hb_098795_030 Hb_002685_220 Hb_002685_220 Hb_001976_020--Hb_002685_220 Hb_007590_100 Hb_007590_100 Hb_001976_020--Hb_007590_100 Hb_004462_030--Hb_007027_010 Hb_004462_030--Hb_000095_070 Hb_004462_030--Hb_060198_010 Hb_001143_140 Hb_001143_140 Hb_004462_030--Hb_001143_140 Hb_004462_030--Hb_000979_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.28404 12.3132 5.93275 26.9354 0.383995 0.542812
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.26329 0.520745 1.1986 17.4908 18.9032

CAGE analysis