Hb_000753_120

Information

Type -
Description -
Location Contig753: 111524-115740
Sequence    

Annotation

kegg
ID rcu:RCOM_1467120
description hypothetical protein
nr
ID XP_012080439.1
description PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067K8Q2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11769 PE=4 SV=1
Gene Ontology
ID GO:0016757
description o-fucosyltransferase family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56906: 111413-115687 , PASA_asmbl_56907: 111413-112579 , PASA_asmbl_56908: 112171-112569
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_120 0.0 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
2 Hb_000230_470 0.0908890586 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
3 Hb_004013_020 0.107690612 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
4 Hb_002909_100 0.1080138512 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
5 Hb_005408_100 0.1115487411 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]
6 Hb_031089_050 0.1174088408 - - kinase, putative [Ricinus communis]
7 Hb_001948_090 0.1278837508 transcription factor TF Family: GRAS hypothetical protein POPTR_0005s14540g [Populus trichocarpa]
8 Hb_004678_010 0.1290271266 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
9 Hb_143766_030 0.1330224962 - - protein with unknown function [Ricinus communis]
10 Hb_000320_270 0.1337033113 - - PREDICTED: 5'-adenylylsulfate reductase 1, chloroplastic [Jatropha curcas]
11 Hb_001102_200 0.133725147 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
12 Hb_000109_190 0.1352486313 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
13 Hb_003912_080 0.1400907634 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
14 Hb_002973_030 0.1435835265 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
15 Hb_009862_020 0.1445928237 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
16 Hb_000473_120 0.1449784119 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
17 Hb_000975_370 0.1460187036 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
18 Hb_000028_430 0.1480246627 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
19 Hb_020805_120 0.1514618898 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
20 Hb_023344_110 0.1523480775 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]

Gene co-expression network

sample Hb_000753_120 Hb_000753_120 Hb_000230_470 Hb_000230_470 Hb_000753_120--Hb_000230_470 Hb_004013_020 Hb_004013_020 Hb_000753_120--Hb_004013_020 Hb_002909_100 Hb_002909_100 Hb_000753_120--Hb_002909_100 Hb_005408_100 Hb_005408_100 Hb_000753_120--Hb_005408_100 Hb_031089_050 Hb_031089_050 Hb_000753_120--Hb_031089_050 Hb_001948_090 Hb_001948_090 Hb_000753_120--Hb_001948_090 Hb_000230_470--Hb_005408_100 Hb_000230_470--Hb_002909_100 Hb_003912_080 Hb_003912_080 Hb_000230_470--Hb_003912_080 Hb_000320_270 Hb_000320_270 Hb_000230_470--Hb_000320_270 Hb_002686_210 Hb_002686_210 Hb_000230_470--Hb_002686_210 Hb_000975_370 Hb_000975_370 Hb_004013_020--Hb_000975_370 Hb_000836_600 Hb_000836_600 Hb_004013_020--Hb_000836_600 Hb_004013_020--Hb_000230_470 Hb_000065_090 Hb_000065_090 Hb_004013_020--Hb_000065_090 Hb_001541_160 Hb_001541_160 Hb_004013_020--Hb_001541_160 Hb_000196_010 Hb_000196_010 Hb_002909_100--Hb_000196_010 Hb_002909_100--Hb_003912_080 Hb_009745_010 Hb_009745_010 Hb_002909_100--Hb_009745_010 Hb_002909_100--Hb_005408_100 Hb_000109_190 Hb_000109_190 Hb_005408_100--Hb_000109_190 Hb_005408_100--Hb_000320_270 Hb_002740_100 Hb_002740_100 Hb_005408_100--Hb_002740_100 Hb_007897_030 Hb_007897_030 Hb_031089_050--Hb_007897_030 Hb_001699_170 Hb_001699_170 Hb_031089_050--Hb_001699_170 Hb_000473_120 Hb_000473_120 Hb_031089_050--Hb_000473_120 Hb_020805_120 Hb_020805_120 Hb_031089_050--Hb_020805_120 Hb_003581_130 Hb_003581_130 Hb_031089_050--Hb_003581_130 Hb_004943_040 Hb_004943_040 Hb_031089_050--Hb_004943_040 Hb_001141_060 Hb_001141_060 Hb_001948_090--Hb_001141_060 Hb_001948_090--Hb_000320_270 Hb_001948_090--Hb_003912_080 Hb_001948_090--Hb_000230_470 Hb_001948_090--Hb_005408_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.30755 66.2224 29.8721 62.4338 5.07308 6.74957
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.04655 5.26617 8.2527 11.2434 51.7693

CAGE analysis