Hb_065525_010

Information

Type -
Description -
Location Contig65525: 18463-20811
Sequence    

Annotation

kegg
ID mus:103991714
description heat shock cognate 70 kDa protein 2
nr
ID KDP44981.1
description hypothetical protein JCGZ_01481 [Jatropha curcas]
swissprot
ID P09189
description Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1
trembl
ID A0A067L941
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01481 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock cognate 70 kda protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52662: 18361-21270
cDNA
(Sanger)
(ID:Location)		 026_A08.ab1: 18362-19436

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065525_010 0.0 - - hypothetical protein JCGZ_01481 [Jatropha curcas]
2 Hb_001318_140 0.1136397408 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
3 Hb_001242_190 0.1141491614 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1 isoform X3 [Jatropha curcas]
4 Hb_013405_100 0.1146060648 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
5 Hb_001619_160 0.1234821673 transcription factor TF Family: ERF DREB1p [Hevea brasiliensis]
6 Hb_006052_060 0.1254970839 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
7 Hb_149484_010 0.1436673716 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor-like [Eucalyptus grandis]
8 Hb_003905_040 0.1442931189 - - PREDICTED: heptahelical transmembrane protein 2 [Jatropha curcas]
9 Hb_001754_200 0.1482741957 - - PREDICTED: U1 small nuclear ribonucleoprotein C [Jatropha curcas]
10 Hb_000087_100 0.1521719546 - - PREDICTED: cellulose synthase-like protein D3 [Jatropha curcas]
11 Hb_002027_170 0.1611018 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3 [Jatropha curcas]
12 Hb_172676_010 0.166091596 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
13 Hb_007382_100 0.1664519227 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
14 Hb_003656_170 0.1667890481 - - PREDICTED: phenylalanine ammonia-lyase-like [Jatropha curcas]
15 Hb_000847_010 0.168060301 - - PREDICTED: uncharacterized protein LOC102608064 [Citrus sinensis]
16 Hb_002809_120 0.16875357 - - Uncharacterized protein TCM_031281 [Theobroma cacao]
17 Hb_006618_020 0.1688143645 - - Vacuolar-processing enzyme precursor [Ricinus communis]
18 Hb_009476_110 0.1717492233 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
19 Hb_001049_160 0.1718194939 - - aldose 1-epimerase, putative [Ricinus communis]
20 Hb_004282_040 0.1726217668 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_065525_010 Hb_065525_010 Hb_001318_140 Hb_001318_140 Hb_065525_010--Hb_001318_140 Hb_001242_190 Hb_001242_190 Hb_065525_010--Hb_001242_190 Hb_013405_100 Hb_013405_100 Hb_065525_010--Hb_013405_100 Hb_001619_160 Hb_001619_160 Hb_065525_010--Hb_001619_160 Hb_006052_060 Hb_006052_060 Hb_065525_010--Hb_006052_060 Hb_149484_010 Hb_149484_010 Hb_065525_010--Hb_149484_010 Hb_007382_100 Hb_007382_100 Hb_001318_140--Hb_007382_100 Hb_000087_100 Hb_000087_100 Hb_001318_140--Hb_000087_100 Hb_001318_140--Hb_006052_060 Hb_001318_140--Hb_001619_160 Hb_001318_140--Hb_149484_010 Hb_001242_190--Hb_001619_160 Hb_001242_190--Hb_006052_060 Hb_001242_190--Hb_001318_140 Hb_000207_290 Hb_000207_290 Hb_001242_190--Hb_000207_290 Hb_001049_160 Hb_001049_160 Hb_001242_190--Hb_001049_160 Hb_002004_010 Hb_002004_010 Hb_013405_100--Hb_002004_010 Hb_097634_010 Hb_097634_010 Hb_013405_100--Hb_097634_010 Hb_013405_100--Hb_001318_140 Hb_013405_100--Hb_001619_160 Hb_005271_180 Hb_005271_180 Hb_013405_100--Hb_005271_180 Hb_001619_160--Hb_006052_060 Hb_001619_160--Hb_001049_160 Hb_001619_160--Hb_007382_100 Hb_003430_070 Hb_003430_070 Hb_006052_060--Hb_003430_070 Hb_172676_010 Hb_172676_010 Hb_006052_060--Hb_172676_010 Hb_006052_060--Hb_149484_010 Hb_003905_040 Hb_003905_040 Hb_149484_010--Hb_003905_040 Hb_149484_010--Hb_003430_070 Hb_005000_050 Hb_005000_050 Hb_149484_010--Hb_005000_050 Hb_000402_030 Hb_000402_030 Hb_149484_010--Hb_000402_030 Hb_005375_070 Hb_005375_070 Hb_149484_010--Hb_005375_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.29103 893.354 271.536 441.282 55.2616 3.82745
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.77 47.2627 66.37 210.551 391.284

CAGE analysis