Hb_002973_030

Information

Type -
Description -
Location Contig2973: 56042-57418
Sequence    

Annotation

kegg
ID rcu:RCOM_0470530
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_002527299.1
description CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
swissprot
ID Q9LEU7
description CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=2 SV=1
trembl
ID B9SMT0
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_0470530 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting serine threonine-protein kinase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002973_030 0.0 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
2 Hb_002004_010 0.1028472351 - - CBL-interacting protein kinase 9 [Populus trichocarpa]
3 Hb_002066_010 0.1308047727 - - PREDICTED: acetylglutamate kinase, chloroplastic [Jatropha curcas]
4 Hb_000479_060 0.1380891219 - - PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]
5 Hb_000753_120 0.1435835265 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
6 Hb_000270_750 0.1438455893 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]
7 Hb_013405_100 0.1495841753 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
8 Hb_000363_250 0.1507244214 - - PREDICTED: pirin-like protein [Malus domestica]
9 Hb_006185_040 0.1514845388 - - PREDICTED: verprolin [Jatropha curcas]
10 Hb_000692_230 0.152805083 - - phospholipase d delta, putative [Ricinus communis]
11 Hb_000320_270 0.1532158902 - - PREDICTED: 5'-adenylylsulfate reductase 1, chloroplastic [Jatropha curcas]
12 Hb_005408_100 0.1535994973 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]
13 Hb_000109_190 0.153952521 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
14 Hb_004013_020 0.1542345216 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
15 Hb_000638_180 0.1563677759 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
16 Hb_005271_180 0.1578093035 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
17 Hb_000230_470 0.1583367006 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
18 Hb_000256_220 0.1606213364 - - PREDICTED: flotillin-like protein 4 [Jatropha curcas]
19 Hb_000975_370 0.1613116551 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
20 Hb_009476_160 0.1615082483 - - RING-H2 finger protein ATL2N, putative [Ricinus communis]

Gene co-expression network

sample Hb_002973_030 Hb_002973_030 Hb_002004_010 Hb_002004_010 Hb_002973_030--Hb_002004_010 Hb_002066_010 Hb_002066_010 Hb_002973_030--Hb_002066_010 Hb_000479_060 Hb_000479_060 Hb_002973_030--Hb_000479_060 Hb_000753_120 Hb_000753_120 Hb_002973_030--Hb_000753_120 Hb_000270_750 Hb_000270_750 Hb_002973_030--Hb_000270_750 Hb_013405_100 Hb_013405_100 Hb_002973_030--Hb_013405_100 Hb_002004_010--Hb_013405_100 Hb_001541_160 Hb_001541_160 Hb_002004_010--Hb_001541_160 Hb_050847_030 Hb_050847_030 Hb_002004_010--Hb_050847_030 Hb_002311_110 Hb_002311_110 Hb_002004_010--Hb_002311_110 Hb_002849_110 Hb_002849_110 Hb_002004_010--Hb_002849_110 Hb_000258_230 Hb_000258_230 Hb_002066_010--Hb_000258_230 Hb_000172_070 Hb_000172_070 Hb_002066_010--Hb_000172_070 Hb_152277_010 Hb_152277_010 Hb_002066_010--Hb_152277_010 Hb_007103_020 Hb_007103_020 Hb_002066_010--Hb_007103_020 Hb_002250_140 Hb_002250_140 Hb_002066_010--Hb_002250_140 Hb_002066_010--Hb_000270_750 Hb_000365_280 Hb_000365_280 Hb_000479_060--Hb_000365_280 Hb_000109_190 Hb_000109_190 Hb_000479_060--Hb_000109_190 Hb_001999_200 Hb_001999_200 Hb_000479_060--Hb_001999_200 Hb_005539_140 Hb_005539_140 Hb_000479_060--Hb_005539_140 Hb_081864_010 Hb_081864_010 Hb_000479_060--Hb_081864_010 Hb_000230_470 Hb_000230_470 Hb_000753_120--Hb_000230_470 Hb_004013_020 Hb_004013_020 Hb_000753_120--Hb_004013_020 Hb_002909_100 Hb_002909_100 Hb_000753_120--Hb_002909_100 Hb_005408_100 Hb_005408_100 Hb_000753_120--Hb_005408_100 Hb_031089_050 Hb_031089_050 Hb_000753_120--Hb_031089_050 Hb_001948_090 Hb_001948_090 Hb_000753_120--Hb_001948_090 Hb_173107_020 Hb_173107_020 Hb_000270_750--Hb_173107_020 Hb_009771_040 Hb_009771_040 Hb_000270_750--Hb_009771_040 Hb_114733_010 Hb_114733_010 Hb_000270_750--Hb_114733_010 Hb_000270_750--Hb_002250_140 Hb_002168_070 Hb_002168_070 Hb_000270_750--Hb_002168_070 Hb_001269_530 Hb_001269_530 Hb_000270_750--Hb_001269_530 Hb_065525_010 Hb_065525_010 Hb_013405_100--Hb_065525_010 Hb_097634_010 Hb_097634_010 Hb_013405_100--Hb_097634_010 Hb_001318_140 Hb_001318_140 Hb_013405_100--Hb_001318_140 Hb_001619_160 Hb_001619_160 Hb_013405_100--Hb_001619_160 Hb_005271_180 Hb_005271_180 Hb_013405_100--Hb_005271_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.50233 70.4614 18.426 79.2816 0.775548 3.70108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.03463 2.0889 2.99677 13.4225 47.7198

CAGE analysis