Hb_081864_010

Information

Type -
Description -
Location Contig81864: 184-901
Sequence    

Annotation

kegg
ID rcu:RCOM_0654550
description ankyrin repeat-containing protein, putative
nr
ID XP_002521356.1
description ankyrin repeat-containing protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S5T7
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0654550 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081864_010 0.0 - - ankyrin repeat-containing protein, putative [Ricinus communis]
2 Hb_001405_170 0.0834235682 - - aspartyl protease family protein [Populus trichocarpa]
3 Hb_010174_200 0.0935266961 - - PREDICTED: uncharacterized protein LOC105644743 isoform X1 [Jatropha curcas]
4 Hb_002960_030 0.1009826774 - - hypothetical protein POPTR_0002s02190g [Populus trichocarpa]
5 Hb_002053_190 0.1147607511 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
6 Hb_002762_100 0.1151036886 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000020_210 0.1167677699 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
8 Hb_039946_060 0.1172371755 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
9 Hb_152277_010 0.1245085594 - - PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like [Jatropha curcas]
10 Hb_029791_010 0.1251602467 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
11 Hb_009771_040 0.1261063485 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
12 Hb_009222_040 0.126271084 transcription factor TF Family: C2C2-Dof DNA binding with one finger 2.4, putative [Theobroma cacao]
13 Hb_002534_070 0.1288461384 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
14 Hb_001541_210 0.1295084017 - - hypothetical protein POPTR_0008s19020g [Populus trichocarpa]
15 Hb_103225_030 0.1305962436 transcription factor TF Family: Orphans DNA binding protein, putative [Ricinus communis]
16 Hb_000849_030 0.1313588377 - - PREDICTED: fimbrin-2 [Jatropha curcas]
17 Hb_001427_100 0.1340120202 - - acc synthase, putative [Ricinus communis]
18 Hb_114733_010 0.1345026675 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
19 Hb_002890_330 0.1351537276 - - caspase, putative [Ricinus communis]
20 Hb_017862_030 0.1355731213 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]

Gene co-expression network

sample Hb_081864_010 Hb_081864_010 Hb_001405_170 Hb_001405_170 Hb_081864_010--Hb_001405_170 Hb_010174_200 Hb_010174_200 Hb_081864_010--Hb_010174_200 Hb_002960_030 Hb_002960_030 Hb_081864_010--Hb_002960_030 Hb_002053_190 Hb_002053_190 Hb_081864_010--Hb_002053_190 Hb_002762_100 Hb_002762_100 Hb_081864_010--Hb_002762_100 Hb_000020_210 Hb_000020_210 Hb_081864_010--Hb_000020_210 Hb_001405_170--Hb_002053_190 Hb_001405_170--Hb_002960_030 Hb_001541_210 Hb_001541_210 Hb_001405_170--Hb_001541_210 Hb_009771_040 Hb_009771_040 Hb_001405_170--Hb_009771_040 Hb_002168_070 Hb_002168_070 Hb_001405_170--Hb_002168_070 Hb_026050_010 Hb_026050_010 Hb_010174_200--Hb_026050_010 Hb_007441_360 Hb_007441_360 Hb_010174_200--Hb_007441_360 Hb_173107_020 Hb_173107_020 Hb_010174_200--Hb_173107_020 Hb_114733_010 Hb_114733_010 Hb_010174_200--Hb_114733_010 Hb_010174_200--Hb_009771_040 Hb_002960_030--Hb_002053_190 Hb_002534_070 Hb_002534_070 Hb_002960_030--Hb_002534_070 Hb_000983_130 Hb_000983_130 Hb_002960_030--Hb_000983_130 Hb_002960_030--Hb_001541_210 Hb_002890_330 Hb_002890_330 Hb_002960_030--Hb_002890_330 Hb_002053_190--Hb_002890_330 Hb_002043_070 Hb_002043_070 Hb_002053_190--Hb_002043_070 Hb_002053_190--Hb_002168_070 Hb_002053_190--Hb_001541_210 Hb_103225_030 Hb_103225_030 Hb_002762_100--Hb_103225_030 Hb_005741_030 Hb_005741_030 Hb_002762_100--Hb_005741_030 Hb_000849_030 Hb_000849_030 Hb_002762_100--Hb_000849_030 Hb_002762_100--Hb_002890_330 Hb_002762_100--Hb_000020_210 Hb_009222_040 Hb_009222_040 Hb_000020_210--Hb_009222_040 Hb_005111_020 Hb_005111_020 Hb_000020_210--Hb_005111_020 Hb_001427_100 Hb_001427_100 Hb_000020_210--Hb_001427_100 Hb_000020_210--Hb_001405_170 Hb_122951_010 Hb_122951_010 Hb_000020_210--Hb_122951_010 Hb_039946_060 Hb_039946_060 Hb_000020_210--Hb_039946_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.5608 3.23522 10.8055 0 0.0697514
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.181674 0.0714002 0.126138 0.379131 4.19075

CAGE analysis