Hb_005741_030

Information

Type -
Description -
Location Contig5741: 48595-56001
Sequence    

Annotation

kegg
ID pop:POPTR_0004s14730g
description hypothetical protein
nr
ID XP_012078958.1
description PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
swissprot
ID Q93XX5
description PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1
trembl
ID A0A067K7S7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14787 PE=4 SV=1
Gene Ontology
ID GO:0008081
description pi-plc x domain-containing protein at5g67130-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49609: 48727-52655
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005741_030 0.0 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
2 Hb_103225_030 0.0588784194 transcription factor TF Family: Orphans DNA binding protein, putative [Ricinus communis]
3 Hb_001408_080 0.0836795435 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
4 Hb_001427_100 0.0878521316 - - acc synthase, putative [Ricinus communis]
5 Hb_036520_030 0.0882766069 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
6 Hb_001541_210 0.0886607115 - - hypothetical protein POPTR_0008s19020g [Populus trichocarpa]
7 Hb_039946_060 0.0889783809 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
8 Hb_003032_110 0.0892130368 - - -
9 Hb_002960_030 0.0955120802 - - hypothetical protein POPTR_0002s02190g [Populus trichocarpa]
10 Hb_003893_130 0.0965376464 - - metal ion binding protein, putative [Ricinus communis]
11 Hb_000849_030 0.0968941905 - - PREDICTED: fimbrin-2 [Jatropha curcas]
12 Hb_002053_190 0.100800995 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
13 Hb_002890_330 0.102154987 - - caspase, putative [Ricinus communis]
14 Hb_003023_030 0.105438524 - - PREDICTED: MATE efflux family protein 5-like isoform X1 [Citrus sinensis]
15 Hb_009785_030 0.1059566187 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
16 Hb_001405_170 0.1084598438 - - aspartyl protease family protein [Populus trichocarpa]
17 Hb_002762_100 0.1091874774 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_002534_070 0.1094835708 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
19 Hb_000680_060 0.1114014494 - - hypothetical protein POPTR_0001s20790g [Populus trichocarpa]
20 Hb_001110_060 0.1123349405 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005741_030 Hb_005741_030 Hb_103225_030 Hb_103225_030 Hb_005741_030--Hb_103225_030 Hb_001408_080 Hb_001408_080 Hb_005741_030--Hb_001408_080 Hb_001427_100 Hb_001427_100 Hb_005741_030--Hb_001427_100 Hb_036520_030 Hb_036520_030 Hb_005741_030--Hb_036520_030 Hb_001541_210 Hb_001541_210 Hb_005741_030--Hb_001541_210 Hb_039946_060 Hb_039946_060 Hb_005741_030--Hb_039946_060 Hb_003023_030 Hb_003023_030 Hb_103225_030--Hb_003023_030 Hb_103225_030--Hb_001408_080 Hb_002534_070 Hb_002534_070 Hb_103225_030--Hb_002534_070 Hb_002762_100 Hb_002762_100 Hb_103225_030--Hb_002762_100 Hb_000849_030 Hb_000849_030 Hb_103225_030--Hb_000849_030 Hb_001110_060 Hb_001110_060 Hb_001408_080--Hb_001110_060 Hb_001408_080--Hb_000849_030 Hb_001408_080--Hb_001427_100 Hb_005111_020 Hb_005111_020 Hb_001408_080--Hb_005111_020 Hb_012132_050 Hb_012132_050 Hb_001408_080--Hb_012132_050 Hb_001408_080--Hb_036520_030 Hb_001427_100--Hb_039946_060 Hb_001427_100--Hb_005111_020 Hb_010164_030 Hb_010164_030 Hb_001427_100--Hb_010164_030 Hb_000020_210 Hb_000020_210 Hb_001427_100--Hb_000020_210 Hb_000012_350 Hb_000012_350 Hb_001427_100--Hb_000012_350 Hb_004032_290 Hb_004032_290 Hb_036520_030--Hb_004032_290 Hb_036520_030--Hb_001427_100 Hb_002874_200 Hb_002874_200 Hb_036520_030--Hb_002874_200 Hb_003466_010 Hb_003466_010 Hb_036520_030--Hb_003466_010 Hb_036520_030--Hb_010164_030 Hb_001405_170 Hb_001405_170 Hb_001541_210--Hb_001405_170 Hb_002890_330 Hb_002890_330 Hb_001541_210--Hb_002890_330 Hb_002053_190 Hb_002053_190 Hb_001541_210--Hb_002053_190 Hb_002960_030 Hb_002960_030 Hb_001541_210--Hb_002960_030 Hb_002043_070 Hb_002043_070 Hb_001541_210--Hb_002043_070 Hb_039946_060--Hb_001405_170 Hb_039946_060--Hb_000020_210 Hb_039946_060--Hb_000012_350 Hb_003054_070 Hb_003054_070 Hb_039946_060--Hb_003054_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0790327 3.84391 4.46359 14.8626 0.0380482 0.0131919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0301417 0 0 0.075693 5.81176

CAGE analysis