Hb_002811_280

Information

Type -
Description -
Location Contig2811: 220219-223709
Sequence    

Annotation

kegg
ID rcu:RCOM_1427650
description aldo/keto reductase, putative (EC:1.1.1.65)
nr
ID XP_012089249.1
description PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
swissprot
ID C6TBN2
description Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1
trembl
ID A0A067JVV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23487 PE=4 SV=1
Gene Ontology
ID GO:0016491
description probable aldo-keto reductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29433: 220241-223544 , PASA_asmbl_29434: 223389-223486 , PASA_asmbl_29435: 224604-227803
cDNA
(Sanger)
(ID:Location)		 027_K22.ab1: 220298-221797

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_280 0.0 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
2 Hb_000110_050 0.1051513108 - - -
3 Hb_001769_060 0.1176401068 - - PREDICTED: F-box protein At3g12350 isoform X1 [Jatropha curcas]
4 Hb_010172_110 0.1436452366 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
5 Hb_000172_280 0.1473081123 - - aspartate aminotransferase, putative [Ricinus communis]
6 Hb_002007_320 0.1474242522 - - PREDICTED: mitogen-activated protein kinase kinase kinase ANP1 [Jatropha curcas]
7 Hb_001616_070 0.1492435023 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
8 Hb_002193_060 0.1494294883 - - PREDICTED: uncharacterized protein C4orf29 homolog [Pyrus x bretschneideri]
9 Hb_000331_350 0.1522795003 - - hypothetical protein JCGZ_11337 [Jatropha curcas]
10 Hb_048476_060 0.1523533144 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
11 Hb_001817_100 0.1567580301 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
12 Hb_002781_050 0.1574405469 - - cytochrome B5 isoform 1, putative [Ricinus communis]
13 Hb_188281_030 0.1579323666 - - PREDICTED: uridine nucleosidase 1 [Jatropha curcas]
14 Hb_005754_040 0.1586345143 - - PREDICTED: uncharacterized protein LOC105636678 isoform X2 [Jatropha curcas]
15 Hb_004032_210 0.1609101387 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000220_110 0.1620346874 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
17 Hb_007002_040 0.1634885639 transcription factor TF Family: PHD DNA replication regulator dpb11, putative [Ricinus communis]
18 Hb_000009_060 0.1636193908 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
19 Hb_001205_080 0.1641611631 - - Protein FAM96B, putative [Ricinus communis]
20 Hb_003813_060 0.1651379547 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002811_280 Hb_002811_280 Hb_000110_050 Hb_000110_050 Hb_002811_280--Hb_000110_050 Hb_001769_060 Hb_001769_060 Hb_002811_280--Hb_001769_060 Hb_010172_110 Hb_010172_110 Hb_002811_280--Hb_010172_110 Hb_000172_280 Hb_000172_280 Hb_002811_280--Hb_000172_280 Hb_002007_320 Hb_002007_320 Hb_002811_280--Hb_002007_320 Hb_001616_070 Hb_001616_070 Hb_002811_280--Hb_001616_070 Hb_048476_060 Hb_048476_060 Hb_000110_050--Hb_048476_060 Hb_000402_130 Hb_000402_130 Hb_000110_050--Hb_000402_130 Hb_012305_130 Hb_012305_130 Hb_000110_050--Hb_012305_130 Hb_001817_100 Hb_001817_100 Hb_000110_050--Hb_001817_100 Hb_002110_100 Hb_002110_100 Hb_000110_050--Hb_002110_100 Hb_000221_240 Hb_000221_240 Hb_001769_060--Hb_000221_240 Hb_001769_060--Hb_000110_050 Hb_001623_190 Hb_001623_190 Hb_001769_060--Hb_001623_190 Hb_001946_310 Hb_001946_310 Hb_001769_060--Hb_001946_310 Hb_003044_080 Hb_003044_080 Hb_001769_060--Hb_003044_080 Hb_000331_350 Hb_000331_350 Hb_010172_110--Hb_000331_350 Hb_007002_040 Hb_007002_040 Hb_010172_110--Hb_007002_040 Hb_000189_170 Hb_000189_170 Hb_010172_110--Hb_000189_170 Hb_000310_120 Hb_000310_120 Hb_010172_110--Hb_000310_120 Hb_001329_070 Hb_001329_070 Hb_010172_110--Hb_001329_070 Hb_000220_110 Hb_000220_110 Hb_000172_280--Hb_000220_110 Hb_002486_080 Hb_002486_080 Hb_000172_280--Hb_002486_080 Hb_124315_010 Hb_124315_010 Hb_000172_280--Hb_124315_010 Hb_000465_150 Hb_000465_150 Hb_000172_280--Hb_000465_150 Hb_000907_150 Hb_000907_150 Hb_000172_280--Hb_000907_150 Hb_001148_090 Hb_001148_090 Hb_000172_280--Hb_001148_090 Hb_002193_060 Hb_002193_060 Hb_002007_320--Hb_002193_060 Hb_003371_070 Hb_003371_070 Hb_002007_320--Hb_003371_070 Hb_000375_300 Hb_000375_300 Hb_002007_320--Hb_000375_300 Hb_000935_040 Hb_000935_040 Hb_002007_320--Hb_000935_040 Hb_000012_080 Hb_000012_080 Hb_002007_320--Hb_000012_080 Hb_000023_310 Hb_000023_310 Hb_002007_320--Hb_000023_310 Hb_000009_060 Hb_000009_060 Hb_001616_070--Hb_000009_060 Hb_003683_130 Hb_003683_130 Hb_001616_070--Hb_003683_130 Hb_000703_330 Hb_000703_330 Hb_001616_070--Hb_000703_330 Hb_001616_070--Hb_000220_110 Hb_000197_190 Hb_000197_190 Hb_001616_070--Hb_000197_190 Hb_007416_070 Hb_007416_070 Hb_001616_070--Hb_007416_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.7061 17.6223 88.5998 132.642 7.88586 5.2732
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.1381 27.0418 40.7729 84.2316 40.2847

CAGE analysis