Hb_000375_300

Information

Type -
Description -
Location Contig375: 301192-305574
Sequence    

Annotation

kegg
ID rcu:RCOM_0038590
description Cyanate hydratase, putative (EC:4.2.1.104)
nr
ID XP_012081601.1
description PREDICTED: cyanate hydratase [Jatropha curcas]
swissprot
ID B9T3R0
description Cyanate hydratase OS=Ricinus communis GN=CYN PE=3 SV=1
trembl
ID A0A067KD26
description Cyanate hydratase OS=Jatropha curcas GN=CYN PE=3 SV=1
Gene Ontology
ID GO:0005829
description cyanate hydratase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38268: 301224-305566
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000375_300 0.0 - - PREDICTED: cyanate hydratase [Jatropha curcas]
2 Hb_002193_060 0.0694840683 - - PREDICTED: uncharacterized protein C4orf29 homolog [Pyrus x bretschneideri]
3 Hb_018845_010 0.0705198058 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
4 Hb_000007_090 0.0801946858 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
5 Hb_001619_060 0.080642852 - - PREDICTED: uncharacterized methyltransferase At1g78140, chloroplastic [Jatropha curcas]
6 Hb_116349_120 0.0820838999 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial isoform X1 [Jatropha curcas]
7 Hb_008725_270 0.0879920854 - - PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
8 Hb_000570_020 0.0894332372 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
9 Hb_000510_170 0.0929439546 - - Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
10 Hb_002007_320 0.0930872045 - - PREDICTED: mitogen-activated protein kinase kinase kinase ANP1 [Jatropha curcas]
11 Hb_002687_200 0.0972791134 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007537_030 0.0982618042 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
13 Hb_185830_060 0.0996942277 - - PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca]
14 Hb_000395_110 0.1003947392 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
15 Hb_007416_070 0.1037841291 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
16 Hb_005686_130 0.1041700591 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase isopentenyl pyrophosphate isomerase [Hevea brasiliensis]
17 Hb_003680_220 0.1043854608 - - hypothetical protein B456_002G243700 [Gossypium raimondii]
18 Hb_000665_170 0.1057583086 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
19 Hb_003929_180 0.1079407628 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X1 [Glycine max]
20 Hb_011671_120 0.1084438251 - - hypothetical protein JCGZ_26275 [Jatropha curcas]

Gene co-expression network

sample Hb_000375_300 Hb_000375_300 Hb_002193_060 Hb_002193_060 Hb_000375_300--Hb_002193_060 Hb_018845_010 Hb_018845_010 Hb_000375_300--Hb_018845_010 Hb_000007_090 Hb_000007_090 Hb_000375_300--Hb_000007_090 Hb_001619_060 Hb_001619_060 Hb_000375_300--Hb_001619_060 Hb_116349_120 Hb_116349_120 Hb_000375_300--Hb_116349_120 Hb_008725_270 Hb_008725_270 Hb_000375_300--Hb_008725_270 Hb_185830_060 Hb_185830_060 Hb_002193_060--Hb_185830_060 Hb_000395_110 Hb_000395_110 Hb_002193_060--Hb_000395_110 Hb_002193_060--Hb_018845_010 Hb_002193_060--Hb_000007_090 Hb_007416_070 Hb_007416_070 Hb_002193_060--Hb_007416_070 Hb_000009_060 Hb_000009_060 Hb_018845_010--Hb_000009_060 Hb_004218_130 Hb_004218_130 Hb_018845_010--Hb_004218_130 Hb_018845_010--Hb_007416_070 Hb_001616_070 Hb_001616_070 Hb_018845_010--Hb_001616_070 Hb_000585_110 Hb_000585_110 Hb_000007_090--Hb_000585_110 Hb_002687_200 Hb_002687_200 Hb_000007_090--Hb_002687_200 Hb_003680_220 Hb_003680_220 Hb_000007_090--Hb_003680_220 Hb_002249_080 Hb_002249_080 Hb_000007_090--Hb_002249_080 Hb_000007_090--Hb_008725_270 Hb_019654_020 Hb_019654_020 Hb_000007_090--Hb_019654_020 Hb_000049_160 Hb_000049_160 Hb_001619_060--Hb_000049_160 Hb_029920_060 Hb_029920_060 Hb_001619_060--Hb_029920_060 Hb_001301_280 Hb_001301_280 Hb_001619_060--Hb_001301_280 Hb_001619_060--Hb_002193_060 Hb_001619_060--Hb_185830_060 Hb_000510_170 Hb_000510_170 Hb_116349_120--Hb_000510_170 Hb_001117_110 Hb_001117_110 Hb_116349_120--Hb_001117_110 Hb_013726_050 Hb_013726_050 Hb_116349_120--Hb_013726_050 Hb_005694_060 Hb_005694_060 Hb_116349_120--Hb_005694_060 Hb_000570_020 Hb_000570_020 Hb_116349_120--Hb_000570_020 Hb_008725_270--Hb_003680_220 Hb_003929_180 Hb_003929_180 Hb_008725_270--Hb_003929_180 Hb_008725_270--Hb_002687_200 Hb_000926_060 Hb_000926_060 Hb_008725_270--Hb_000926_060 Hb_000500_220 Hb_000500_220 Hb_008725_270--Hb_000500_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.31916 11.4776 24.2103 33.9277 4.20438 4.21952
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.83077 11.1434 7.20658 15.426 22.0466

CAGE analysis