Hb_002603_110

Information

Type -
Description -
Location Contig2603: 79836-82542
Sequence    

Annotation

kegg
ID rcu:RCOM_0399190
description hydrolase, putative
nr
ID XP_012087559.1
description PREDICTED: uncharacterized protein LOC105646325 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9T866
description Hydrolase, putative OS=Ricinus communis GN=RCOM_0399190 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta hydrolase related protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002603_110 0.0 - - PREDICTED: uncharacterized protein LOC105646325 [Jatropha curcas]
2 Hb_001975_030 0.1660664267 - - 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, partial [Plectranthus barbatus]
3 Hb_000483_100 0.1739861407 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 9-like [Jatropha curcas]
4 Hb_000008_060 0.1759855564 - - protein binding protein, putative [Ricinus communis]
5 Hb_000086_390 0.1801497416 - - PREDICTED: uncharacterized protein LOC105644503 [Jatropha curcas]
6 Hb_003226_200 0.1811727098 - - magnesium/proton exchanger, putative [Ricinus communis]
7 Hb_032568_010 0.1857802049 - - PREDICTED: protein phosphatase 2C 56-like [Jatropha curcas]
8 Hb_003680_140 0.1897792874 - - PREDICTED: uncharacterized protein LOC105121770 [Populus euphratica]
9 Hb_002343_010 0.1915353537 - - amino acid binding protein, putative [Ricinus communis]
10 Hb_008179_010 0.1919501237 transcription factor TF Family: ARF PREDICTED: auxin response factor 16 [Jatropha curcas]
11 Hb_002890_300 0.1934640677 - - abhydrolase domain containing, putative [Ricinus communis]
12 Hb_052764_070 0.1980458949 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
13 Hb_000116_020 0.2061788882 - - PREDICTED: serine acetyltransferase 2-like isoform X1 [Jatropha curcas]
14 Hb_002391_320 0.2078587735 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
15 Hb_001098_030 0.2087192679 - - PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Populus euphratica]
16 Hb_002527_040 0.2103653574 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
17 Hb_000599_210 0.2118783958 - - serine/threonine-protein kinase, putative [Ricinus communis]
18 Hb_000028_430 0.213276129 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
19 Hb_000016_200 0.2133840261 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000679_030 0.2135590876 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5 [Jatropha curcas]

Gene co-expression network

sample Hb_002603_110 Hb_002603_110 Hb_001975_030 Hb_001975_030 Hb_002603_110--Hb_001975_030 Hb_000483_100 Hb_000483_100 Hb_002603_110--Hb_000483_100 Hb_000008_060 Hb_000008_060 Hb_002603_110--Hb_000008_060 Hb_000086_390 Hb_000086_390 Hb_002603_110--Hb_000086_390 Hb_003226_200 Hb_003226_200 Hb_002603_110--Hb_003226_200 Hb_032568_010 Hb_032568_010 Hb_002603_110--Hb_032568_010 Hb_001817_100 Hb_001817_100 Hb_001975_030--Hb_001817_100 Hb_007590_090 Hb_007590_090 Hb_001975_030--Hb_007590_090 Hb_000012_110 Hb_000012_110 Hb_001975_030--Hb_000012_110 Hb_002615_030 Hb_002615_030 Hb_001975_030--Hb_002615_030 Hb_001998_200 Hb_001998_200 Hb_001975_030--Hb_001998_200 Hb_000110_060 Hb_000110_060 Hb_001975_030--Hb_000110_060 Hb_004545_120 Hb_004545_120 Hb_000483_100--Hb_004545_120 Hb_002343_010 Hb_002343_010 Hb_000483_100--Hb_002343_010 Hb_001054_070 Hb_001054_070 Hb_000483_100--Hb_001054_070 Hb_000016_200 Hb_000016_200 Hb_000483_100--Hb_000016_200 Hb_001269_470 Hb_001269_470 Hb_000483_100--Hb_001269_470 Hb_002890_300 Hb_002890_300 Hb_000483_100--Hb_002890_300 Hb_000008_060--Hb_003226_200 Hb_003778_020 Hb_003778_020 Hb_000008_060--Hb_003778_020 Hb_000622_060 Hb_000622_060 Hb_000008_060--Hb_000622_060 Hb_000130_200 Hb_000130_200 Hb_000008_060--Hb_000130_200 Hb_000115_360 Hb_000115_360 Hb_000008_060--Hb_000115_360 Hb_000849_120 Hb_000849_120 Hb_000008_060--Hb_000849_120 Hb_002527_040 Hb_002527_040 Hb_000086_390--Hb_002527_040 Hb_008179_010 Hb_008179_010 Hb_000086_390--Hb_008179_010 Hb_011310_180 Hb_011310_180 Hb_000086_390--Hb_011310_180 Hb_002780_030 Hb_002780_030 Hb_000086_390--Hb_002780_030 Hb_002475_140 Hb_002475_140 Hb_000086_390--Hb_002475_140 Hb_020378_060 Hb_020378_060 Hb_000086_390--Hb_020378_060 Hb_033152_110 Hb_033152_110 Hb_003226_200--Hb_033152_110 Hb_003226_200--Hb_000622_060 Hb_003226_200--Hb_000115_360 Hb_000979_260 Hb_000979_260 Hb_003226_200--Hb_000979_260 Hb_002759_220 Hb_002759_220 Hb_003226_200--Hb_002759_220 Hb_032568_010--Hb_002890_300 Hb_002391_320 Hb_002391_320 Hb_032568_010--Hb_002391_320 Hb_005488_130 Hb_005488_130 Hb_032568_010--Hb_005488_130 Hb_007101_260 Hb_007101_260 Hb_032568_010--Hb_007101_260 Hb_000753_110 Hb_000753_110 Hb_032568_010--Hb_000753_110 Hb_000116_020 Hb_000116_020 Hb_032568_010--Hb_000116_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0197275 4.4205 5.16113 8.71267 0 0.021176
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12784 5.53561 2.95632 1.80842 8.69359

CAGE analysis