Hb_002890_300

Information

Type -
Description -
Location Contig2890: 347927-350286
Sequence    

Annotation

kegg
ID rcu:RCOM_0824970
description abhydrolase domain containing, putative
nr
ID XP_002525864.1
description abhydrolase domain containing, putative [Ricinus communis]
swissprot
ID P24640
description Lipase 3 OS=Moraxella sp. (strain TA144) GN=lip3 PE=1 SV=1
trembl
ID B9SIP5
description Abhydrolase domain containing, putative OS=Ricinus communis GN=RCOM_0824970 PE=4 SV=1
Gene Ontology
ID GO:0005737
description monoacylglycerol lipase abhd6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30224: 348719-350353
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002890_300 0.0 - - abhydrolase domain containing, putative [Ricinus communis]
2 Hb_032568_010 0.1155811382 - - PREDICTED: protein phosphatase 2C 56-like [Jatropha curcas]
3 Hb_008179_030 0.1495255374 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 8 [Jatropha curcas]
4 Hb_000011_560 0.1504978355 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
5 Hb_000116_020 0.1530291703 - - PREDICTED: serine acetyltransferase 2-like isoform X1 [Jatropha curcas]
6 Hb_006153_150 0.1654162621 - - PREDICTED: uncharacterized protein LOC105645999 [Jatropha curcas]
7 Hb_000483_100 0.1690863216 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 9-like [Jatropha curcas]
8 Hb_004545_120 0.170364239 - - PREDICTED: uncharacterized protein LOC105647604 [Jatropha curcas]
9 Hb_003664_030 0.1756400608 - - PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Jatropha curcas]
10 Hb_000834_060 0.1785261781 - - PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_002759_220 0.1800088002 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
12 Hb_000069_360 0.1800605381 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005488_130 0.1828106543 - - transporter, putative [Ricinus communis]
14 Hb_005305_010 0.1829666272 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46 [Jatropha curcas]
15 Hb_001153_100 0.1849540356 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Jatropha curcas]
16 Hb_005784_030 0.1850108252 - - PREDICTED: uncharacterized protein LOC105645162 isoform X2 [Jatropha curcas]
17 Hb_000140_060 0.1858409174 - - 50S ribosomal protein L5, putative [Ricinus communis]
18 Hb_002391_320 0.1863791782 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
19 Hb_003226_200 0.1870857203 - - magnesium/proton exchanger, putative [Ricinus communis]
20 Hb_002641_120 0.1874566914 - - PREDICTED: calmodulin [Jatropha curcas]

Gene co-expression network

sample Hb_002890_300 Hb_002890_300 Hb_032568_010 Hb_032568_010 Hb_002890_300--Hb_032568_010 Hb_008179_030 Hb_008179_030 Hb_002890_300--Hb_008179_030 Hb_000011_560 Hb_000011_560 Hb_002890_300--Hb_000011_560 Hb_000116_020 Hb_000116_020 Hb_002890_300--Hb_000116_020 Hb_006153_150 Hb_006153_150 Hb_002890_300--Hb_006153_150 Hb_000483_100 Hb_000483_100 Hb_002890_300--Hb_000483_100 Hb_002391_320 Hb_002391_320 Hb_032568_010--Hb_002391_320 Hb_005488_130 Hb_005488_130 Hb_032568_010--Hb_005488_130 Hb_007101_260 Hb_007101_260 Hb_032568_010--Hb_007101_260 Hb_000753_110 Hb_000753_110 Hb_032568_010--Hb_000753_110 Hb_032568_010--Hb_000116_020 Hb_000390_210 Hb_000390_210 Hb_008179_030--Hb_000390_210 Hb_000322_030 Hb_000322_030 Hb_008179_030--Hb_000322_030 Hb_000140_060 Hb_000140_060 Hb_008179_030--Hb_000140_060 Hb_000099_170 Hb_000099_170 Hb_008179_030--Hb_000099_170 Hb_003664_030 Hb_003664_030 Hb_008179_030--Hb_003664_030 Hb_000069_360 Hb_000069_360 Hb_008179_030--Hb_000069_360 Hb_004545_120 Hb_004545_120 Hb_000011_560--Hb_004545_120 Hb_000310_060 Hb_000310_060 Hb_000011_560--Hb_000310_060 Hb_001587_040 Hb_001587_040 Hb_000011_560--Hb_001587_040 Hb_000327_200 Hb_000327_200 Hb_000011_560--Hb_000327_200 Hb_005527_060 Hb_005527_060 Hb_000011_560--Hb_005527_060 Hb_000011_560--Hb_003664_030 Hb_003602_060 Hb_003602_060 Hb_000116_020--Hb_003602_060 Hb_001863_070 Hb_001863_070 Hb_000116_020--Hb_001863_070 Hb_000116_020--Hb_006153_150 Hb_001329_070 Hb_001329_070 Hb_000116_020--Hb_001329_070 Hb_000749_260 Hb_000749_260 Hb_006153_150--Hb_000749_260 Hb_006153_150--Hb_000390_210 Hb_147378_010 Hb_147378_010 Hb_006153_150--Hb_147378_010 Hb_002701_070 Hb_002701_070 Hb_006153_150--Hb_002701_070 Hb_001544_050 Hb_001544_050 Hb_006153_150--Hb_001544_050 Hb_005784_030 Hb_005784_030 Hb_006153_150--Hb_005784_030 Hb_000483_100--Hb_004545_120 Hb_002343_010 Hb_002343_010 Hb_000483_100--Hb_002343_010 Hb_001054_070 Hb_001054_070 Hb_000483_100--Hb_001054_070 Hb_000016_200 Hb_000016_200 Hb_000483_100--Hb_000016_200 Hb_001269_470 Hb_001269_470 Hb_000483_100--Hb_001269_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0603752 0.270242 0.684836 0.471053 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0552898 0.217411 0.159303 0.0700691 0.707917

CAGE analysis