Hb_000322_030

Information

Type -
Description -
Location Contig322: 40671-43529
Sequence    

Annotation

kegg
ID tcc:TCM_037604
description Lactoylglutathione lyase / glyoxalase I family protein
nr
ID XP_012076972.1
description PREDICTED: uncharacterized protein LOC105637911 [Jatropha curcas]
swissprot
ID P45871
description Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1
trembl
ID A0A067KCK2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07438 PE=4 SV=1
Gene Ontology
ID GO:0009507
description lactoylglutathione lyase glyoxalase i family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34029: 40624-43453
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000322_030 0.0 - - PREDICTED: uncharacterized protein LOC105637911 [Jatropha curcas]
2 Hb_000181_330 0.0914621783 - - ubiquitin ligase protein cop1, putative [Ricinus communis]
3 Hb_000099_170 0.0972191887 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
4 Hb_000390_210 0.0991078485 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
5 Hb_000388_080 0.1093134761 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
6 Hb_000958_120 0.1095827506 - - PREDICTED: uncharacterized protein LOC105646385 [Jatropha curcas]
7 Hb_000227_400 0.1154189263 - - lipoxygenase, putative [Ricinus communis]
8 Hb_000984_150 0.1154749097 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008179_030 0.1162441831 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 8 [Jatropha curcas]
10 Hb_000243_060 0.1165838679 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
11 Hb_001544_050 0.1168721104 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
12 Hb_000417_050 0.1194551327 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
13 Hb_000130_130 0.1233032407 - - hypothetical protein POPTR_0001s40330g [Populus trichocarpa]
14 Hb_002662_110 0.1234679931 - - Kinesin heavy chain, putative [Ricinus communis]
15 Hb_000061_250 0.1246638592 - - hypothetical protein JCGZ_11665 [Jatropha curcas]
16 Hb_000749_260 0.124817649 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
17 Hb_004531_170 0.1249656211 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
18 Hb_000076_250 0.1253628263 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004994_330 0.1267303217 - - DNA binding protein, putative [Ricinus communis]
20 Hb_001141_350 0.1270034896 - - hypothetical protein JCGZ_02174 [Jatropha curcas]

Gene co-expression network

sample Hb_000322_030 Hb_000322_030 Hb_000181_330 Hb_000181_330 Hb_000322_030--Hb_000181_330 Hb_000099_170 Hb_000099_170 Hb_000322_030--Hb_000099_170 Hb_000390_210 Hb_000390_210 Hb_000322_030--Hb_000390_210 Hb_000388_080 Hb_000388_080 Hb_000322_030--Hb_000388_080 Hb_000958_120 Hb_000958_120 Hb_000322_030--Hb_000958_120 Hb_000227_400 Hb_000227_400 Hb_000322_030--Hb_000227_400 Hb_000243_060 Hb_000243_060 Hb_000181_330--Hb_000243_060 Hb_002311_280 Hb_002311_280 Hb_000181_330--Hb_002311_280 Hb_000272_030 Hb_000272_030 Hb_000181_330--Hb_000272_030 Hb_004531_170 Hb_004531_170 Hb_000181_330--Hb_004531_170 Hb_000173_270 Hb_000173_270 Hb_000181_330--Hb_000173_270 Hb_071079_020 Hb_071079_020 Hb_000099_170--Hb_071079_020 Hb_000108_150 Hb_000108_150 Hb_000099_170--Hb_000108_150 Hb_002675_080 Hb_002675_080 Hb_000099_170--Hb_002675_080 Hb_005181_120 Hb_005181_120 Hb_000099_170--Hb_005181_120 Hb_000061_250 Hb_000061_250 Hb_000099_170--Hb_000061_250 Hb_001544_050 Hb_001544_050 Hb_000390_210--Hb_001544_050 Hb_000749_260 Hb_000749_260 Hb_000390_210--Hb_000749_260 Hb_147378_010 Hb_147378_010 Hb_000390_210--Hb_147378_010 Hb_143004_020 Hb_143004_020 Hb_000390_210--Hb_143004_020 Hb_000390_210--Hb_000061_250 Hb_000076_250 Hb_000076_250 Hb_000388_080--Hb_000076_250 Hb_000357_070 Hb_000357_070 Hb_000388_080--Hb_000357_070 Hb_002028_110 Hb_002028_110 Hb_000388_080--Hb_002028_110 Hb_004994_330 Hb_004994_330 Hb_000388_080--Hb_004994_330 Hb_001579_300 Hb_001579_300 Hb_000388_080--Hb_001579_300 Hb_001922_110 Hb_001922_110 Hb_000958_120--Hb_001922_110 Hb_002701_070 Hb_002701_070 Hb_000958_120--Hb_002701_070 Hb_000958_120--Hb_000227_400 Hb_000958_120--Hb_000390_210 Hb_000958_120--Hb_001544_050 Hb_000227_400--Hb_001922_110 Hb_010868_040 Hb_010868_040 Hb_000227_400--Hb_010868_040 Hb_004855_020 Hb_004855_020 Hb_000227_400--Hb_004855_020 Hb_000207_350 Hb_000207_350 Hb_000227_400--Hb_000207_350 Hb_000227_400--Hb_000243_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6644 67.3792 221.779 161.482 12.0431 11.0845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1855 13.4946 11.8706 16.4401 199.939

CAGE analysis