Hb_002475_150

Information

Type -
Description -
Location Contig2475: 122901-130110
Sequence    

Annotation

kegg
ID rcu:RCOM_0241780
description importin beta-3, putative
nr
ID XP_012086461.1
description PREDICTED: importin subunit beta-3-like [Jatropha curcas]
swissprot
ID O00410
description Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4
trembl
ID A0A067JPM9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22554 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002475_150 0.0 - - PREDICTED: importin subunit beta-3-like [Jatropha curcas]
2 Hb_001811_080 0.2247843839 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
3 Hb_001373_130 0.2271189537 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003906_060 0.2277535813 - - hypothetical protein VITISV_022975 [Vitis vinifera]
5 Hb_009615_180 0.2345570134 - - lipoic acid synthetase, putative [Ricinus communis]
6 Hb_005743_030 0.2437787224 - - hypothetical protein, partial [Pseudomonas fluorescens]
7 Hb_000856_130 0.2473890499 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
8 Hb_010691_010 0.24924616 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
9 Hb_000023_050 0.2505820246 - - PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
10 Hb_012404_080 0.2512963289 - - PREDICTED: ABC transporter G family member 34-like [Jatropha curcas]
11 Hb_002235_100 0.2537604897 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 isoform X1 [Jatropha curcas]
12 Hb_002811_190 0.2554198851 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
13 Hb_000130_200 0.2557167529 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
14 Hb_000318_400 0.2573442188 - - conserved hypothetical protein [Ricinus communis]
15 Hb_178968_080 0.259455031 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
16 Hb_000230_170 0.2595660171 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
17 Hb_004021_020 0.2598390413 - - PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
18 Hb_004357_060 0.2608251203 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
19 Hb_003226_190 0.2635867226 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
20 Hb_003186_040 0.2643806229 - - PREDICTED: protein DENND6A [Jatropha curcas]

Gene co-expression network

sample Hb_002475_150 Hb_002475_150 Hb_001811_080 Hb_001811_080 Hb_002475_150--Hb_001811_080 Hb_001373_130 Hb_001373_130 Hb_002475_150--Hb_001373_130 Hb_003906_060 Hb_003906_060 Hb_002475_150--Hb_003906_060 Hb_009615_180 Hb_009615_180 Hb_002475_150--Hb_009615_180 Hb_005743_030 Hb_005743_030 Hb_002475_150--Hb_005743_030 Hb_000856_130 Hb_000856_130 Hb_002475_150--Hb_000856_130 Hb_000329_080 Hb_000329_080 Hb_001811_080--Hb_000329_080 Hb_002811_190 Hb_002811_190 Hb_001811_080--Hb_002811_190 Hb_000163_110 Hb_000163_110 Hb_001811_080--Hb_000163_110 Hb_000963_090 Hb_000963_090 Hb_001811_080--Hb_000963_090 Hb_000977_150 Hb_000977_150 Hb_001811_080--Hb_000977_150 Hb_001365_010 Hb_001365_010 Hb_001811_080--Hb_001365_010 Hb_000594_100 Hb_000594_100 Hb_001373_130--Hb_000594_100 Hb_000983_070 Hb_000983_070 Hb_001373_130--Hb_000983_070 Hb_010128_020 Hb_010128_020 Hb_001373_130--Hb_010128_020 Hb_002529_090 Hb_002529_090 Hb_001373_130--Hb_002529_090 Hb_005489_090 Hb_005489_090 Hb_001373_130--Hb_005489_090 Hb_003935_080 Hb_003935_080 Hb_001373_130--Hb_003935_080 Hb_067664_010 Hb_067664_010 Hb_003906_060--Hb_067664_010 Hb_000130_200 Hb_000130_200 Hb_003906_060--Hb_000130_200 Hb_178968_080 Hb_178968_080 Hb_003906_060--Hb_178968_080 Hb_000032_600 Hb_000032_600 Hb_003906_060--Hb_000032_600 Hb_003906_060--Hb_000977_150 Hb_012404_080 Hb_012404_080 Hb_003906_060--Hb_012404_080 Hb_003226_190 Hb_003226_190 Hb_009615_180--Hb_003226_190 Hb_000184_030 Hb_000184_030 Hb_009615_180--Hb_000184_030 Hb_002783_150 Hb_002783_150 Hb_009615_180--Hb_002783_150 Hb_001294_030 Hb_001294_030 Hb_009615_180--Hb_001294_030 Hb_126917_010 Hb_126917_010 Hb_009615_180--Hb_126917_010 Hb_000352_220 Hb_000352_220 Hb_009615_180--Hb_000352_220 Hb_000318_400 Hb_000318_400 Hb_005743_030--Hb_000318_400 Hb_001005_040 Hb_001005_040 Hb_005743_030--Hb_001005_040 Hb_004864_010 Hb_004864_010 Hb_005743_030--Hb_004864_010 Hb_012023_010 Hb_012023_010 Hb_005743_030--Hb_012023_010 Hb_021443_050 Hb_021443_050 Hb_005743_030--Hb_021443_050 Hb_001534_040 Hb_001534_040 Hb_005743_030--Hb_001534_040 Hb_000856_130--Hb_004864_010 Hb_000856_130--Hb_021443_050 Hb_002400_080 Hb_002400_080 Hb_000856_130--Hb_002400_080 Hb_001497_040 Hb_001497_040 Hb_000856_130--Hb_001497_040 Hb_003913_040 Hb_003913_040 Hb_000856_130--Hb_003913_040 Hb_000856_130--Hb_005743_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0246428 0.0433531 0.0820678 0.059071 0 0.014941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.132065 0.0279442 0.174876 0.405013

CAGE analysis