Hb_001597_050

Information

Type -
Description -
Location Contig1597: 137346-139616
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0004061
description kynurenine formamidase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001597_050 0.0 - - -
2 Hb_001584_240 0.1825232481 - - ADP-ribosylation factor [Gossypium barbadense]
3 Hb_000740_150 0.192456029 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
4 Hb_001486_270 0.1948138605 - - Ann10 [Manihot esculenta]
5 Hb_000776_060 0.1960734978 - - histone H4 [Zea mays]
6 Hb_000483_400 0.1998072312 - - PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Jatropha curcas]
7 Hb_003875_010 0.2030108224 - - hypothetical protein POPTR_0002s14490g, partial [Populus trichocarpa]
8 Hb_000157_050 0.2043688945 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002228_080 0.2058276059 - - hypothetical protein JCGZ_12924 [Jatropha curcas]
10 Hb_000282_050 0.2084620269 - - calcineurin B, putative [Ricinus communis]
11 Hb_003178_020 0.211892719 transcription factor TF Family: B3 conserved hypothetical protein [Ricinus communis]
12 Hb_133799_010 0.2142906275 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006711_090 0.2145692692 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
14 Hb_000109_230 0.2147672327 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000252_220 0.2159930627 - - PREDICTED: copper amine oxidase 1-like isoform X2 [Beta vulgaris subsp. vulgaris]
16 Hb_001767_060 0.2173999077 - - PREDICTED: sulfate transporter 4.1, chloroplastic-like isoform X1 [Jatropha curcas]
17 Hb_178968_040 0.2192470626 - - conserved hypothetical protein [Ricinus communis]
18 Hb_034726_010 0.2195134152 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Jatropha curcas]
19 Hb_002498_030 0.2228913026 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000256_080 0.2237676823 - - PREDICTED: deSI-like protein At4g17486 [Jatropha curcas]

Gene co-expression network

sample Hb_001597_050 Hb_001597_050 Hb_001584_240 Hb_001584_240 Hb_001597_050--Hb_001584_240 Hb_000740_150 Hb_000740_150 Hb_001597_050--Hb_000740_150 Hb_001486_270 Hb_001486_270 Hb_001597_050--Hb_001486_270 Hb_000776_060 Hb_000776_060 Hb_001597_050--Hb_000776_060 Hb_000483_400 Hb_000483_400 Hb_001597_050--Hb_000483_400 Hb_003875_010 Hb_003875_010 Hb_001597_050--Hb_003875_010 Hb_002960_130 Hb_002960_130 Hb_001584_240--Hb_002960_130 Hb_000671_130 Hb_000671_130 Hb_001584_240--Hb_000671_130 Hb_001195_070 Hb_001195_070 Hb_001584_240--Hb_001195_070 Hb_048476_060 Hb_048476_060 Hb_001584_240--Hb_048476_060 Hb_083380_020 Hb_083380_020 Hb_001584_240--Hb_083380_020 Hb_001208_040 Hb_001208_040 Hb_001584_240--Hb_001208_040 Hb_014508_010 Hb_014508_010 Hb_000740_150--Hb_014508_010 Hb_017439_010 Hb_017439_010 Hb_000740_150--Hb_017439_010 Hb_001268_160 Hb_001268_160 Hb_000740_150--Hb_001268_160 Hb_003055_090 Hb_003055_090 Hb_000740_150--Hb_003055_090 Hb_001408_170 Hb_001408_170 Hb_000740_150--Hb_001408_170 Hb_029977_020 Hb_029977_020 Hb_000740_150--Hb_029977_020 Hb_000260_280 Hb_000260_280 Hb_001486_270--Hb_000260_280 Hb_002228_080 Hb_002228_080 Hb_001486_270--Hb_002228_080 Hb_029920_020 Hb_029920_020 Hb_001486_270--Hb_029920_020 Hb_175933_010 Hb_175933_010 Hb_001486_270--Hb_175933_010 Hb_000192_020 Hb_000192_020 Hb_001486_270--Hb_000192_020 Hb_000796_020 Hb_000796_020 Hb_000776_060--Hb_000796_020 Hb_000062_090 Hb_000062_090 Hb_000776_060--Hb_000062_090 Hb_030992_010 Hb_030992_010 Hb_000776_060--Hb_030992_010 Hb_012760_050 Hb_012760_050 Hb_000776_060--Hb_012760_050 Hb_001195_410 Hb_001195_410 Hb_000776_060--Hb_001195_410 Hb_006711_090 Hb_006711_090 Hb_000776_060--Hb_006711_090 Hb_000483_400--Hb_000796_020 Hb_000240_120 Hb_000240_120 Hb_000483_400--Hb_000240_120 Hb_000483_400--Hb_175933_010 Hb_004453_070 Hb_004453_070 Hb_000483_400--Hb_004453_070 Hb_000683_100 Hb_000683_100 Hb_000483_400--Hb_000683_100 Hb_000217_020 Hb_000217_020 Hb_000483_400--Hb_000217_020 Hb_001195_720 Hb_001195_720 Hb_003875_010--Hb_001195_720 Hb_104571_010 Hb_104571_010 Hb_003875_010--Hb_104571_010 Hb_000816_190 Hb_000816_190 Hb_003875_010--Hb_000816_190 Hb_003207_150 Hb_003207_150 Hb_003875_010--Hb_003207_150 Hb_014720_100 Hb_014720_100 Hb_003875_010--Hb_014720_100 Hb_001366_170 Hb_001366_170 Hb_003875_010--Hb_001366_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.47721 4.74521 35.538 89.0456 1.39141 1.93688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.3889 33.7373 9.12158 3.71168 12.0344

CAGE analysis