Hb_000661_060

Information

Type -
Description -
Location Contig661: 57555-60768
Sequence    

Annotation

kegg
ID rcu:RCOM_1020480
description hypothetical protein
nr
ID KDP20325.1
description hypothetical protein JCGZ_06411 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JK00
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06411 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_060 0.0 - - hypothetical protein JCGZ_06411 [Jatropha curcas]
2 Hb_001767_130 0.2101381479 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
3 Hb_000679_190 0.2179748917 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
4 Hb_002781_030 0.2282632594 - - protein binding protein, putative [Ricinus communis]
5 Hb_050147_010 0.2301085896 - - hypothetical protein B456_005G052100 [Gossypium raimondii]
6 Hb_000915_240 0.2409517353 - - catalytic, putative [Ricinus communis]
7 Hb_029510_100 0.2432003191 - - scab resistance family protein [Populus trichocarpa]
8 Hb_006002_040 0.2437446463 - - PREDICTED: uncharacterized protein LOC105638085 [Jatropha curcas]
9 Hb_001247_300 0.24635332 - - hypothetical protein JCGZ_23167 [Jatropha curcas]
10 Hb_000258_240 0.246624178 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
11 Hb_000120_230 0.2475312271 - - PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like [Jatropha curcas]
12 Hb_001247_190 0.2479798138 - - unnamed protein product [Vitis vinifera]
13 Hb_000603_070 0.2487007667 - - -
14 Hb_135757_020 0.2487643015 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
15 Hb_002133_020 0.2495728389 - - conserved hypothetical protein [Ricinus communis]
16 Hb_044486_030 0.2496040052 - - DMI1, partial [Cycas revoluta]
17 Hb_023827_020 0.2500478412 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
18 Hb_001124_110 0.2500907349 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
19 Hb_091349_010 0.2502937983 - - hypothetical protein EUGRSUZ_C02287 [Eucalyptus grandis]
20 Hb_003305_020 0.2503453267 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]

Gene co-expression network

sample Hb_000661_060 Hb_000661_060 Hb_001767_130 Hb_001767_130 Hb_000661_060--Hb_001767_130 Hb_000679_190 Hb_000679_190 Hb_000661_060--Hb_000679_190 Hb_002781_030 Hb_002781_030 Hb_000661_060--Hb_002781_030 Hb_050147_010 Hb_050147_010 Hb_000661_060--Hb_050147_010 Hb_000915_240 Hb_000915_240 Hb_000661_060--Hb_000915_240 Hb_029510_100 Hb_029510_100 Hb_000661_060--Hb_029510_100 Hb_088163_010 Hb_088163_010 Hb_001767_130--Hb_088163_010 Hb_002102_030 Hb_002102_030 Hb_001767_130--Hb_002102_030 Hb_000035_200 Hb_000035_200 Hb_001767_130--Hb_000035_200 Hb_131035_010 Hb_131035_010 Hb_001767_130--Hb_131035_010 Hb_002148_020 Hb_002148_020 Hb_001767_130--Hb_002148_020 Hb_003925_020 Hb_003925_020 Hb_001767_130--Hb_003925_020 Hb_001946_310 Hb_001946_310 Hb_000679_190--Hb_001946_310 Hb_000824_050 Hb_000824_050 Hb_000679_190--Hb_000824_050 Hb_135757_020 Hb_135757_020 Hb_000679_190--Hb_135757_020 Hb_000586_030 Hb_000586_030 Hb_000679_190--Hb_000586_030 Hb_001318_050 Hb_001318_050 Hb_000679_190--Hb_001318_050 Hb_003780_020 Hb_003780_020 Hb_000679_190--Hb_003780_020 Hb_000258_240 Hb_000258_240 Hb_002781_030--Hb_000258_240 Hb_000928_190 Hb_000928_190 Hb_002781_030--Hb_000928_190 Hb_000359_090 Hb_000359_090 Hb_002781_030--Hb_000359_090 Hb_148130_020 Hb_148130_020 Hb_002781_030--Hb_148130_020 Hb_013057_020 Hb_013057_020 Hb_002781_030--Hb_013057_020 Hb_001481_150 Hb_001481_150 Hb_002781_030--Hb_001481_150 Hb_000109_170 Hb_000109_170 Hb_050147_010--Hb_000109_170 Hb_003940_040 Hb_003940_040 Hb_050147_010--Hb_003940_040 Hb_002631_080 Hb_002631_080 Hb_050147_010--Hb_002631_080 Hb_003813_050 Hb_003813_050 Hb_050147_010--Hb_003813_050 Hb_001268_110 Hb_001268_110 Hb_050147_010--Hb_001268_110 Hb_021443_100 Hb_021443_100 Hb_050147_010--Hb_021443_100 Hb_002686_310 Hb_002686_310 Hb_000915_240--Hb_002686_310 Hb_001369_360 Hb_001369_360 Hb_000915_240--Hb_001369_360 Hb_000915_240--Hb_000109_170 Hb_000352_300 Hb_000352_300 Hb_000915_240--Hb_000352_300 Hb_000130_180 Hb_000130_180 Hb_000915_240--Hb_000130_180 Hb_001014_210 Hb_001014_210 Hb_000915_240--Hb_001014_210 Hb_001014_190 Hb_001014_190 Hb_029510_100--Hb_001014_190 Hb_004330_080 Hb_004330_080 Hb_029510_100--Hb_004330_080 Hb_019280_020 Hb_019280_020 Hb_029510_100--Hb_019280_020 Hb_004094_020 Hb_004094_020 Hb_029510_100--Hb_004094_020 Hb_000120_230 Hb_000120_230 Hb_029510_100--Hb_000120_230 Hb_012362_030 Hb_012362_030 Hb_029510_100--Hb_012362_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0862233 0.349135 0.14269 1.91513 0.35818 0.58577
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0526431 0.70384 0.684455 1.283 0.16902

CAGE analysis