Hb_000567_400

Information

Type -
Description -
Location Contig567: 431881-433687
Sequence    

Annotation

kegg
ID pop:POPTR_0002s06150g
description POPTRDRAFT_347058; cytochrome P450 family protein
nr
ID XP_002302147.1
description cytochrome P450 family protein [Populus trichocarpa]
swissprot
ID Q6WG30
description Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2
trembl
ID B9GT44
description Cytochrome P450 family protein OS=Populus trichocarpa GN=POPTR_0002s06150g PE=3 SV=1
Gene Ontology
ID GO:0005506
description taxadiene 5-alpha hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000567_400 0.0 - - cytochrome P450 family protein [Populus trichocarpa]
2 Hb_007336_050 0.2183606547 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
3 Hb_003786_080 0.2285403691 - - electron transporter, putative [Ricinus communis]
4 Hb_006487_040 0.2396167401 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
5 Hb_003992_050 0.2632191528 - - delta 9 desaturase, putative [Ricinus communis]
6 Hb_002067_010 0.270200112 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000438_130 0.2732073358 - - uroporphyrinogen decarboxylase, putative [Ricinus communis]
8 Hb_003938_170 0.2733314433 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Jatropha curcas]
9 Hb_000816_210 0.2796667657 - - PREDICTED: uroporphyrinogen decarboxylase isoform X2 [Jatropha curcas]
10 Hb_002603_090 0.2904104908 - - PREDICTED: GDSL esterase/lipase CPRD49-like isoform X2 [Populus euphratica]
11 Hb_027654_070 0.29091705 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002960_110 0.2951936242 - - PREDICTED: synaptotagmin-2 isoform X1 [Jatropha curcas]
13 Hb_001386_090 0.3039674958 - - PREDICTED: uncharacterized protein LOC105632529 [Jatropha curcas]
14 Hb_000035_210 0.3050308855 - - PREDICTED: BTB/POZ domain-containing protein NPY1 [Jatropha curcas]
15 Hb_003638_040 0.3053237106 - - kinesin heavy chain, putative [Ricinus communis]
16 Hb_002986_140 0.3057257667 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
17 Hb_000106_110 0.3073704618 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
18 Hb_006916_060 0.3088870043 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
19 Hb_003020_060 0.3095081494 - - PREDICTED: low-temperature-induced 65 kDa protein [Jatropha curcas]
20 Hb_000207_140 0.3110220697 - - hypothetical protein POPTR_0019s11310g [Populus trichocarpa]

Gene co-expression network

sample Hb_000567_400 Hb_000567_400 Hb_007336_050 Hb_007336_050 Hb_000567_400--Hb_007336_050 Hb_003786_080 Hb_003786_080 Hb_000567_400--Hb_003786_080 Hb_006487_040 Hb_006487_040 Hb_000567_400--Hb_006487_040 Hb_003992_050 Hb_003992_050 Hb_000567_400--Hb_003992_050 Hb_002067_010 Hb_002067_010 Hb_000567_400--Hb_002067_010 Hb_000438_130 Hb_000438_130 Hb_000567_400--Hb_000438_130 Hb_000816_210 Hb_000816_210 Hb_007336_050--Hb_000816_210 Hb_007336_050--Hb_000438_130 Hb_002603_090 Hb_002603_090 Hb_007336_050--Hb_002603_090 Hb_011457_120 Hb_011457_120 Hb_007336_050--Hb_011457_120 Hb_003638_040 Hb_003638_040 Hb_007336_050--Hb_003638_040 Hb_029510_130 Hb_029510_130 Hb_007336_050--Hb_029510_130 Hb_000035_210 Hb_000035_210 Hb_003786_080--Hb_000035_210 Hb_001638_310 Hb_001638_310 Hb_003786_080--Hb_001638_310 Hb_003786_080--Hb_000438_130 Hb_000977_170 Hb_000977_170 Hb_003786_080--Hb_000977_170 Hb_003786_080--Hb_006487_040 Hb_000802_050 Hb_000802_050 Hb_003786_080--Hb_000802_050 Hb_006487_040--Hb_003992_050 Hb_027654_070 Hb_027654_070 Hb_006487_040--Hb_027654_070 Hb_002986_140 Hb_002986_140 Hb_006487_040--Hb_002986_140 Hb_002999_030 Hb_002999_030 Hb_006487_040--Hb_002999_030 Hb_006487_040--Hb_000035_210 Hb_002435_090 Hb_002435_090 Hb_003992_050--Hb_002435_090 Hb_000207_140 Hb_000207_140 Hb_003992_050--Hb_000207_140 Hb_001975_050 Hb_001975_050 Hb_003992_050--Hb_001975_050 Hb_140360_010 Hb_140360_010 Hb_003992_050--Hb_140360_010 Hb_188739_010 Hb_188739_010 Hb_003992_050--Hb_188739_010 Hb_001386_090 Hb_001386_090 Hb_003992_050--Hb_001386_090 Hb_001507_080 Hb_001507_080 Hb_002067_010--Hb_001507_080 Hb_074792_010 Hb_074792_010 Hb_002067_010--Hb_074792_010 Hb_003430_040 Hb_003430_040 Hb_002067_010--Hb_003430_040 Hb_003874_010 Hb_003874_010 Hb_002067_010--Hb_003874_010 Hb_004342_020 Hb_004342_020 Hb_002067_010--Hb_004342_020 Hb_010080_010 Hb_010080_010 Hb_002067_010--Hb_010080_010 Hb_000438_130--Hb_001386_090 Hb_000392_450 Hb_000392_450 Hb_000438_130--Hb_000392_450 Hb_001711_060 Hb_001711_060 Hb_000438_130--Hb_001711_060 Hb_002027_320 Hb_002027_320 Hb_000438_130--Hb_002027_320 Hb_012653_030 Hb_012653_030 Hb_000438_130--Hb_012653_030 Hb_003397_030 Hb_003397_030 Hb_000438_130--Hb_003397_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0142279 0.0117838 0.490669 0.0551046 0.0799522 0.0517781
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0324235 0 0.14359 0 0.10658

CAGE analysis