Hb_004342_020

Information

Type -
Description -
Location Contig4342: 12484-15785
Sequence    

Annotation

kegg
ID rcu:RCOM_0799040
description Serine/threonine-protein kinase, putative (EC:2.7.11.1)
nr
ID XP_012077351.1
description PREDICTED: serine/threonine-protein kinase Aurora-1 isoform X2 [Jatropha curcas]
swissprot
ID Q9M077
description Serine/threonine-protein kinase Aurora-1 OS=Arabidopsis thaliana GN=AUR1 PE=1 SV=1
trembl
ID A0A067KQQ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07715 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase aurora-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42419: 12641-15785
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004342_020 0.0 - - PREDICTED: serine/threonine-protein kinase Aurora-1 isoform X2 [Jatropha curcas]
2 Hb_019715_010 0.1380352305 - - carbon catabolite repressor protein, putative [Ricinus communis]
3 Hb_001277_280 0.1730016123 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
4 Hb_001377_030 0.1866275262 - - PREDICTED: histone H3-like centromeric protein HTR12 [Jatropha curcas]
5 Hb_002450_040 0.1918286115 - - PREDICTED: DNA-directed RNA polymerases II and V subunit 6B [Vitis vinifera]
6 Hb_011249_030 0.1939648565 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
7 Hb_026549_020 0.194964506 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_002232_190 0.2008588638 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000369_010 0.2028075504 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000009_610 0.2041371287 - - PREDICTED: uncharacterized protein LOC105639638 isoform X2 [Jatropha curcas]
11 Hb_001124_070 0.205404967 - - Serine/threonine-protein kinase ULK4 [Gossypium arboreum]
12 Hb_002067_010 0.20706779 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001140_270 0.2094973508 - - hypothetical protein EUGRSUZ_E00166 [Eucalyptus grandis]
14 Hb_010080_010 0.2101008871 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
15 Hb_006831_100 0.2101698839 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
16 Hb_140833_010 0.2110293928 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
17 Hb_023765_020 0.2118388213 - - PREDICTED: putative SNAP25 homologous protein SNAP30 [Populus euphratica]
18 Hb_000297_110 0.2124064486 - - PREDICTED: uncharacterized protein LOC105634718 [Jatropha curcas]
19 Hb_000120_250 0.216048259 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
20 Hb_000922_420 0.2165134735 - - glutaredoxin-1, grx1, putative [Ricinus communis]

Gene co-expression network

sample Hb_004342_020 Hb_004342_020 Hb_019715_010 Hb_019715_010 Hb_004342_020--Hb_019715_010 Hb_001277_280 Hb_001277_280 Hb_004342_020--Hb_001277_280 Hb_001377_030 Hb_001377_030 Hb_004342_020--Hb_001377_030 Hb_002450_040 Hb_002450_040 Hb_004342_020--Hb_002450_040 Hb_011249_030 Hb_011249_030 Hb_004342_020--Hb_011249_030 Hb_026549_020 Hb_026549_020 Hb_004342_020--Hb_026549_020 Hb_019715_010--Hb_011249_030 Hb_019715_010--Hb_001277_280 Hb_005463_130 Hb_005463_130 Hb_019715_010--Hb_005463_130 Hb_000287_050 Hb_000287_050 Hb_019715_010--Hb_000287_050 Hb_000012_270 Hb_000012_270 Hb_019715_010--Hb_000012_270 Hb_001277_280--Hb_011249_030 Hb_006816_100 Hb_006816_100 Hb_001277_280--Hb_006816_100 Hb_004128_200 Hb_004128_200 Hb_001277_280--Hb_004128_200 Hb_000959_220 Hb_000959_220 Hb_001277_280--Hb_000959_220 Hb_001517_050 Hb_001517_050 Hb_001277_280--Hb_001517_050 Hb_001005_020 Hb_001005_020 Hb_001277_280--Hb_001005_020 Hb_003050_110 Hb_003050_110 Hb_001377_030--Hb_003050_110 Hb_001377_030--Hb_002450_040 Hb_000000_360 Hb_000000_360 Hb_001377_030--Hb_000000_360 Hb_140833_010 Hb_140833_010 Hb_001377_030--Hb_140833_010 Hb_004934_030 Hb_004934_030 Hb_001377_030--Hb_004934_030 Hb_000260_800 Hb_000260_800 Hb_001377_030--Hb_000260_800 Hb_000926_180 Hb_000926_180 Hb_002450_040--Hb_000926_180 Hb_007313_090 Hb_007313_090 Hb_002450_040--Hb_007313_090 Hb_001373_110 Hb_001373_110 Hb_002450_040--Hb_001373_110 Hb_000297_110 Hb_000297_110 Hb_002450_040--Hb_000297_110 Hb_000976_260 Hb_000976_260 Hb_002450_040--Hb_000976_260 Hb_011249_030--Hb_000287_050 Hb_039605_010 Hb_039605_010 Hb_011249_030--Hb_039605_010 Hb_011249_030--Hb_004128_200 Hb_029142_030 Hb_029142_030 Hb_011249_030--Hb_029142_030 Hb_065755_030 Hb_065755_030 Hb_011249_030--Hb_065755_030 Hb_029259_010 Hb_029259_010 Hb_026549_020--Hb_029259_010 Hb_001140_270 Hb_001140_270 Hb_026549_020--Hb_001140_270 Hb_010577_030 Hb_010577_030 Hb_026549_020--Hb_010577_030 Hb_000025_030 Hb_000025_030 Hb_026549_020--Hb_000025_030 Hb_001012_010 Hb_001012_010 Hb_026549_020--Hb_001012_010 Hb_007982_080 Hb_007982_080 Hb_026549_020--Hb_007982_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
37.5808 13.4281 126.521 24.6351 55.0856 31.4469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.5486 17.0722 40.3732 17.5528 2.64643

CAGE analysis