Hb_006816_100

Information

Type -
Description -
Location Contig6816: 79073-80853
Sequence    

Annotation

kegg
ID zma:100384293
description hypothetical protein
nr
ID KDO81674.1
description hypothetical protein CISIN_1g0373181mg, partial [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067GQ11
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0373181mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53789: 62195-81084
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_100 0.0 - - hypothetical protein CISIN_1g0373181mg, partial [Citrus sinensis]
2 Hb_001277_280 0.0788172398 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
3 Hb_002284_210 0.0842101246 - - PREDICTED: protein canopy-1 [Jatropha curcas]
4 Hb_003760_030 0.0858303496 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
5 Hb_001517_050 0.0872238231 transcription factor TF Family: BBR-BPC conserved hypothetical protein [Ricinus communis]
6 Hb_002485_030 0.0949413376 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1-like [Jatropha curcas]
7 Hb_065755_030 0.0992324976 - - -
8 Hb_002686_080 0.1044785316 transcription factor TF Family: PHD PREDICTED: PHD finger protein ING2-like [Jatropha curcas]
9 Hb_000340_130 0.1056374254 - - PREDICTED: uncharacterized protein LOC105650033 isoform X1 [Jatropha curcas]
10 Hb_077026_010 0.1058533849 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
11 Hb_001322_020 0.1065270501 - - PREDICTED: polycomb group protein VERNALIZATION 2-like isoform X2 [Populus euphratica]
12 Hb_000959_220 0.1069374851 - - zinc finger protein, putative [Ricinus communis]
13 Hb_011249_030 0.1075921185 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
14 Hb_000173_310 0.1077655965 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
15 Hb_003119_090 0.1087071684 - - PREDICTED: 14-3-3 protein 6 [Jatropha curcas]
16 Hb_011671_310 0.1099198169 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
17 Hb_002874_180 0.1099642648 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]
18 Hb_000012_270 0.1107306452 - - NADH-plastoquinone oxidoreductase, putative [Ricinus communis]
19 Hb_143766_020 0.1137141198 - - putative phospholipase A2 [Gossypium arboreum]
20 Hb_002326_110 0.1137305709 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]

Gene co-expression network

sample Hb_006816_100 Hb_006816_100 Hb_001277_280 Hb_001277_280 Hb_006816_100--Hb_001277_280 Hb_002284_210 Hb_002284_210 Hb_006816_100--Hb_002284_210 Hb_003760_030 Hb_003760_030 Hb_006816_100--Hb_003760_030 Hb_001517_050 Hb_001517_050 Hb_006816_100--Hb_001517_050 Hb_002485_030 Hb_002485_030 Hb_006816_100--Hb_002485_030 Hb_065755_030 Hb_065755_030 Hb_006816_100--Hb_065755_030 Hb_011249_030 Hb_011249_030 Hb_001277_280--Hb_011249_030 Hb_004128_200 Hb_004128_200 Hb_001277_280--Hb_004128_200 Hb_000959_220 Hb_000959_220 Hb_001277_280--Hb_000959_220 Hb_001277_280--Hb_001517_050 Hb_001005_020 Hb_001005_020 Hb_001277_280--Hb_001005_020 Hb_002284_210--Hb_003760_030 Hb_002874_180 Hb_002874_180 Hb_002284_210--Hb_002874_180 Hb_010098_020 Hb_010098_020 Hb_002284_210--Hb_010098_020 Hb_143766_020 Hb_143766_020 Hb_002284_210--Hb_143766_020 Hb_002686_080 Hb_002686_080 Hb_002284_210--Hb_002686_080 Hb_003119_090 Hb_003119_090 Hb_003760_030--Hb_003119_090 Hb_007007_040 Hb_007007_040 Hb_003760_030--Hb_007007_040 Hb_003760_030--Hb_065755_030 Hb_000751_030 Hb_000751_030 Hb_003760_030--Hb_000751_030 Hb_001501_080 Hb_001501_080 Hb_003760_030--Hb_001501_080 Hb_003760_030--Hb_002485_030 Hb_000300_260 Hb_000300_260 Hb_001517_050--Hb_000300_260 Hb_002284_150 Hb_002284_150 Hb_001517_050--Hb_002284_150 Hb_000789_320 Hb_000789_320 Hb_001517_050--Hb_000789_320 Hb_012340_090 Hb_012340_090 Hb_001517_050--Hb_012340_090 Hb_003213_010 Hb_003213_010 Hb_001517_050--Hb_003213_010 Hb_001085_260 Hb_001085_260 Hb_002485_030--Hb_001085_260 Hb_002485_030--Hb_003119_090 Hb_000103_120 Hb_000103_120 Hb_002485_030--Hb_000103_120 Hb_000494_080 Hb_000494_080 Hb_002485_030--Hb_000494_080 Hb_178968_140 Hb_178968_140 Hb_065755_030--Hb_178968_140 Hb_001328_030 Hb_001328_030 Hb_065755_030--Hb_001328_030 Hb_005731_110 Hb_005731_110 Hb_065755_030--Hb_005731_110 Hb_065755_030--Hb_000959_220 Hb_001776_060 Hb_001776_060 Hb_065755_030--Hb_001776_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.9589 36.1437 116.345 60.632 36.2833 38.6854
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.8788 29.8796 23.1245 20.5977 30.0513

CAGE analysis