Hb_011457_120

Information

Type -
Description -
Location Contig11457: 95490-100503
Sequence    

Annotation

kegg
ID pop:POPTR_0005s23530g
description POPTRDRAFT_801425; Sulfate transporter 3.2 family protein
nr
ID XP_012092183.1
description PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
swissprot
ID Q9SV13
description Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1
trembl
ID A0A067JPE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21885 PE=4 SV=1
Gene Ontology
ID GO:0009507
description sulfate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011457_120 0.0 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
2 Hb_002942_150 0.1112266718 - - serine carboxypeptidase, putative [Ricinus communis]
3 Hb_000020_040 0.1309998095 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
4 Hb_059567_010 0.1592143603 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]
5 Hb_004093_030 0.1713370686 - - hypothetical protein RCOM_1406750 [Ricinus communis]
6 Hb_000206_030 0.1713627654 - - PREDICTED: uncharacterized protein LOC105639682 [Jatropha curcas]
7 Hb_001266_150 0.1747022048 - - hypothetical protein JCGZ_14961 [Jatropha curcas]
8 Hb_004079_090 0.1799791896 - - hypothetical protein RCOM_1053120 [Ricinus communis]
9 Hb_002851_040 0.186377205 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 5 [Jatropha curcas]
10 Hb_007336_050 0.1865102301 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
11 Hb_010288_030 0.1880454614 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
12 Hb_000243_230 0.1891175661 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_002232_310 0.1939337397 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
14 Hb_001755_040 0.1963774132 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
15 Hb_003935_090 0.1991384152 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
16 Hb_081529_010 0.2080982409 - - unnamed protein product [Vitis vinifera]
17 Hb_011033_010 0.2084646589 - - ATP-binding cassette transporter, putative [Ricinus communis]
18 Hb_007574_020 0.2088312484 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
19 Hb_000932_110 0.2103154081 - - Root phototropism protein, putative [Ricinus communis]
20 Hb_001662_120 0.2116384989 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_011457_120 Hb_011457_120 Hb_002942_150 Hb_002942_150 Hb_011457_120--Hb_002942_150 Hb_000020_040 Hb_000020_040 Hb_011457_120--Hb_000020_040 Hb_059567_010 Hb_059567_010 Hb_011457_120--Hb_059567_010 Hb_004093_030 Hb_004093_030 Hb_011457_120--Hb_004093_030 Hb_000206_030 Hb_000206_030 Hb_011457_120--Hb_000206_030 Hb_001266_150 Hb_001266_150 Hb_011457_120--Hb_001266_150 Hb_002942_150--Hb_000020_040 Hb_007002_050 Hb_007002_050 Hb_002942_150--Hb_007002_050 Hb_002443_010 Hb_002443_010 Hb_002942_150--Hb_002443_010 Hb_007336_050 Hb_007336_050 Hb_002942_150--Hb_007336_050 Hb_002232_310 Hb_002232_310 Hb_002942_150--Hb_002232_310 Hb_004079_090 Hb_004079_090 Hb_000020_040--Hb_004079_090 Hb_001755_040 Hb_001755_040 Hb_000020_040--Hb_001755_040 Hb_000020_040--Hb_002232_310 Hb_011360_130 Hb_011360_130 Hb_000020_040--Hb_011360_130 Hb_014497_070 Hb_014497_070 Hb_000020_040--Hb_014497_070 Hb_059567_010--Hb_001266_150 Hb_000925_150 Hb_000925_150 Hb_059567_010--Hb_000925_150 Hb_001140_190 Hb_001140_190 Hb_059567_010--Hb_001140_190 Hb_000932_110 Hb_000932_110 Hb_059567_010--Hb_000932_110 Hb_000958_160 Hb_000958_160 Hb_059567_010--Hb_000958_160 Hb_001817_040 Hb_001817_040 Hb_004093_030--Hb_001817_040 Hb_011033_010 Hb_011033_010 Hb_004093_030--Hb_011033_010 Hb_004093_030--Hb_001266_150 Hb_000061_430 Hb_000061_430 Hb_004093_030--Hb_000061_430 Hb_028487_060 Hb_028487_060 Hb_004093_030--Hb_028487_060 Hb_000206_030--Hb_001266_150 Hb_011004_050 Hb_011004_050 Hb_000206_030--Hb_011004_050 Hb_014320_010 Hb_014320_010 Hb_000206_030--Hb_014320_010 Hb_000224_080 Hb_000224_080 Hb_000206_030--Hb_000224_080 Hb_000206_030--Hb_000020_040 Hb_001266_150--Hb_000932_110 Hb_001266_150--Hb_001140_190 Hb_000352_010 Hb_000352_010 Hb_001266_150--Hb_000352_010 Hb_010288_030 Hb_010288_030 Hb_001266_150--Hb_010288_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.171623 0.00824128 1.63812 0.61921 0.0644731 0.0363767
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0377813 0 0.0848997 0.011811 0.315507

CAGE analysis