Hb_002443_010

Information

Type -
Description -
Location Contig2443: 20414-22240
Sequence    

Annotation

kegg
ID rcu:RCOM_0341680
description multicopper oxidase, putative (EC:1.10.3.3)
nr
ID XP_002523381.1
description multicopper oxidase, putative [Ricinus communis]
swissprot
ID Q00624
description L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1
trembl
ID B9SBL2
description Multicopper oxidase, putative OS=Ricinus communis GN=RCOM_0341680 PE=4 SV=1
Gene Ontology
ID GO:0005507
description l-ascorbate oxidase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002443_010 0.0 - - multicopper oxidase, putative [Ricinus communis]
2 Hb_185494_010 0.1515843413 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_003541_010 0.1934180013 - - transcription factor, putative [Ricinus communis]
4 Hb_000347_170 0.1965997191 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
5 Hb_002942_150 0.1996770638 - - serine carboxypeptidase, putative [Ricinus communis]
6 Hb_062773_010 0.2030803089 - - beta glucosidase [Manihot esculenta]
7 Hb_002540_060 0.2075107088 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH48 isoform X2 [Jatropha curcas]
8 Hb_001862_070 0.2109517738 - - hypothetical protein RCOM_1155060 [Ricinus communis]
9 Hb_000111_080 0.2117582258 - - hypothetical protein JCGZ_24534 [Jatropha curcas]
10 Hb_000243_360 0.2145871113 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
11 Hb_165330_010 0.2211177496 - - BnaUnng00840D [Brassica napus]
12 Hb_002028_070 0.2218888292 - - PREDICTED: circadian locomoter output cycles protein kaput [Jatropha curcas]
13 Hb_032880_010 0.2222527736 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
14 Hb_103990_010 0.2225012925 - - PREDICTED: light-induced protein, chloroplastic-like [Nicotiana sylvestris]
15 Hb_102129_040 0.2234342016 - - PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X1 [Jatropha curcas]
16 Hb_136441_010 0.2234907246 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
17 Hb_001329_060 0.2235582864 - - Polygalacturonase precursor, putative [Ricinus communis]
18 Hb_006586_060 0.2240554748 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
19 Hb_000167_150 0.2247362914 - - hypothetical protein POPTR_0008s03590g [Populus trichocarpa]
20 Hb_000751_010 0.2249328871 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002443_010 Hb_002443_010 Hb_185494_010 Hb_185494_010 Hb_002443_010--Hb_185494_010 Hb_003541_010 Hb_003541_010 Hb_002443_010--Hb_003541_010 Hb_000347_170 Hb_000347_170 Hb_002443_010--Hb_000347_170 Hb_002942_150 Hb_002942_150 Hb_002443_010--Hb_002942_150 Hb_062773_010 Hb_062773_010 Hb_002443_010--Hb_062773_010 Hb_002540_060 Hb_002540_060 Hb_002443_010--Hb_002540_060 Hb_185494_010--Hb_002540_060 Hb_000574_380 Hb_000574_380 Hb_185494_010--Hb_000574_380 Hb_005197_030 Hb_005197_030 Hb_185494_010--Hb_005197_030 Hb_185494_010--Hb_003541_010 Hb_185494_010--Hb_000347_170 Hb_000465_110 Hb_000465_110 Hb_003541_010--Hb_000465_110 Hb_003209_190 Hb_003209_190 Hb_003541_010--Hb_003209_190 Hb_019762_030 Hb_019762_030 Hb_003541_010--Hb_019762_030 Hb_000853_340 Hb_000853_340 Hb_003541_010--Hb_000853_340 Hb_063584_010 Hb_063584_010 Hb_003541_010--Hb_063584_010 Hb_004223_120 Hb_004223_120 Hb_000347_170--Hb_004223_120 Hb_006649_100 Hb_006649_100 Hb_000347_170--Hb_006649_100 Hb_003411_070 Hb_003411_070 Hb_000347_170--Hb_003411_070 Hb_031862_190 Hb_031862_190 Hb_000347_170--Hb_031862_190 Hb_009293_030 Hb_009293_030 Hb_000347_170--Hb_009293_030 Hb_000187_100 Hb_000187_100 Hb_000347_170--Hb_000187_100 Hb_011457_120 Hb_011457_120 Hb_002942_150--Hb_011457_120 Hb_000020_040 Hb_000020_040 Hb_002942_150--Hb_000020_040 Hb_007002_050 Hb_007002_050 Hb_002942_150--Hb_007002_050 Hb_007336_050 Hb_007336_050 Hb_002942_150--Hb_007336_050 Hb_002232_310 Hb_002232_310 Hb_002942_150--Hb_002232_310 Hb_002121_030 Hb_002121_030 Hb_062773_010--Hb_002121_030 Hb_000160_260 Hb_000160_260 Hb_062773_010--Hb_000160_260 Hb_001369_590 Hb_001369_590 Hb_062773_010--Hb_001369_590 Hb_005365_040 Hb_005365_040 Hb_062773_010--Hb_005365_040 Hb_001671_070 Hb_001671_070 Hb_062773_010--Hb_001671_070 Hb_105148_020 Hb_105148_020 Hb_062773_010--Hb_105148_020 Hb_000028_150 Hb_000028_150 Hb_002540_060--Hb_000028_150 Hb_001343_120 Hb_001343_120 Hb_002540_060--Hb_001343_120 Hb_000110_240 Hb_000110_240 Hb_002540_060--Hb_000110_240 Hb_000207_140 Hb_000207_140 Hb_002540_060--Hb_000207_140 Hb_007479_010 Hb_007479_010 Hb_002540_060--Hb_007479_010 Hb_002435_090 Hb_002435_090 Hb_002540_060--Hb_002435_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0122537 0 0.159824 0.0274082 0.0122751 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0460845

CAGE analysis