Hb_062773_010

Information

Type -
Description -
Location Contig62773: 147-706
Sequence    

Annotation

kegg
ID rcu:RCOM_0827850
description beta-glucosidase, putative (EC:3.2.1.21)
nr
ID CAA64442.1
description beta glucosidase [Manihot esculenta]
swissprot
ID Q75W17
description Furcatin hydrolase OS=Viburnum furcatum PE=1 SV=1
trembl
ID Q40283
description Beta glucosidase OS=Manihot esculenta GN=bglA PE=3 SV=1
Gene Ontology
ID GO:0009536
description beta glucosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062773_010 0.0 - - beta glucosidase [Manihot esculenta]
2 Hb_002121_030 0.094377804 - - Ribonuclease P protein subunit P38-related isoform 1 [Theobroma cacao]
3 Hb_000160_260 0.1034810254 - - nutrient reservoir, putative [Ricinus communis]
4 Hb_001369_590 0.1035525508 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
5 Hb_005365_040 0.1054990837 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
6 Hb_001671_070 0.1099153735 - - kinase, putative [Ricinus communis]
7 Hb_105148_020 0.1154887725 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
8 Hb_000735_190 0.1214831434 - - hypothetical protein POPTR_0006s19340g [Populus trichocarpa]
9 Hb_000152_650 0.126316113 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
10 Hb_000084_210 0.1284367115 - - hypothetical protein POPTR_0016s08050g [Populus trichocarpa]
11 Hb_000144_130 0.1312481268 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005357_140 0.1315808052 - - Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis]
13 Hb_003050_140 0.1318517499 - - PREDICTED: potassium channel KAT1 [Jatropha curcas]
14 Hb_000347_170 0.1319392834 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
15 Hb_054615_010 0.132493973 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
16 Hb_004003_020 0.1329748925 - - unnamed protein product [Coffea canephora]
17 Hb_006586_060 0.1334477371 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
18 Hb_002499_050 0.1345761824 - - receptor protein kinase, putative [Ricinus communis]
19 Hb_000431_080 0.1346453042 - - PREDICTED: uncharacterized protein LOC105632547 [Jatropha curcas]
20 Hb_006620_030 0.1347207163 - - nitrate reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_062773_010 Hb_062773_010 Hb_002121_030 Hb_002121_030 Hb_062773_010--Hb_002121_030 Hb_000160_260 Hb_000160_260 Hb_062773_010--Hb_000160_260 Hb_001369_590 Hb_001369_590 Hb_062773_010--Hb_001369_590 Hb_005365_040 Hb_005365_040 Hb_062773_010--Hb_005365_040 Hb_001671_070 Hb_001671_070 Hb_062773_010--Hb_001671_070 Hb_105148_020 Hb_105148_020 Hb_062773_010--Hb_105148_020 Hb_002121_030--Hb_001369_590 Hb_000051_150 Hb_000051_150 Hb_002121_030--Hb_000051_150 Hb_000809_220 Hb_000809_220 Hb_002121_030--Hb_000809_220 Hb_000152_650 Hb_000152_650 Hb_002121_030--Hb_000152_650 Hb_054615_010 Hb_054615_010 Hb_002121_030--Hb_054615_010 Hb_002121_030--Hb_005365_040 Hb_000735_190 Hb_000735_190 Hb_000160_260--Hb_000735_190 Hb_000160_260--Hb_001671_070 Hb_006586_060 Hb_006586_060 Hb_000160_260--Hb_006586_060 Hb_000751_010 Hb_000751_010 Hb_000160_260--Hb_000751_010 Hb_102129_040 Hb_102129_040 Hb_000160_260--Hb_102129_040 Hb_031862_190 Hb_031862_190 Hb_000160_260--Hb_031862_190 Hb_001369_590--Hb_005365_040 Hb_002499_050 Hb_002499_050 Hb_001369_590--Hb_002499_050 Hb_006620_030 Hb_006620_030 Hb_001369_590--Hb_006620_030 Hb_001369_590--Hb_000152_650 Hb_000084_210 Hb_000084_210 Hb_001369_590--Hb_000084_210 Hb_005365_040--Hb_000051_150 Hb_000187_100 Hb_000187_100 Hb_005365_040--Hb_000187_100 Hb_005365_040--Hb_000160_260 Hb_005365_040--Hb_000084_210 Hb_031377_010 Hb_031377_010 Hb_001671_070--Hb_031377_010 Hb_000144_130 Hb_000144_130 Hb_001671_070--Hb_000144_130 Hb_001671_070--Hb_000735_190 Hb_032880_010 Hb_032880_010 Hb_001671_070--Hb_032880_010 Hb_000130_340 Hb_000130_340 Hb_001671_070--Hb_000130_340 Hb_019053_040 Hb_019053_040 Hb_105148_020--Hb_019053_040 Hb_105148_020--Hb_006620_030 Hb_001166_010 Hb_001166_010 Hb_105148_020--Hb_001166_010 Hb_023582_010 Hb_023582_010 Hb_105148_020--Hb_023582_010 Hb_001258_130 Hb_001258_130 Hb_105148_020--Hb_001258_130 Hb_023827_030 Hb_023827_030 Hb_105148_020--Hb_023827_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.198735 0.214655 7.52484 1.80324 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.21498

CAGE analysis