Hb_032880_010

Information

Type -
Description -
Location Contig32880: 6044-9599
Sequence    

Annotation

kegg
ID vvi:100259574
description beta-glucosidase 12-like
nr
ID XP_012074776.1
description PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
swissprot
ID Q75W17
description Furcatin hydrolase OS=Viburnum furcatum PE=1 SV=1
trembl
ID Q84L69
description P66 protein OS=Hevea brasiliensis GN=P66 PE=2 SV=1
Gene Ontology
ID GO:0016787
description glycoside hydrolase family 1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032880_010 0.0 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
2 Hb_031377_010 0.0633371782 transcription factor TF Family: C2C2-YABBY unknown [Populus trichocarpa]
3 Hb_001671_070 0.0634163641 - - kinase, putative [Ricinus communis]
4 Hb_000172_660 0.0641660311 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
5 Hb_002929_030 0.0647082149 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
6 Hb_001153_170 0.0685711543 - - PREDICTED: protein HOTHEAD [Populus euphratica]
7 Hb_004627_050 0.0707237024 - - Chlorophyll a-b binding protein 6A [Morus notabilis]
8 Hb_006594_030 0.0720158344 - - -
9 Hb_007617_030 0.07226318 - - hypothetical protein JCGZ_26801 [Jatropha curcas]
10 Hb_009771_010 0.0726857088 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
11 Hb_089140_130 0.0746310099 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]
12 Hb_000136_120 0.0756548096 - - PREDICTED: probable strigolactone esterase D14 homolog [Jatropha curcas]
13 Hb_001546_140 0.0760669044 - - Auxin-binding protein ABP19a precursor, putative [Ricinus communis]
14 Hb_000144_130 0.0775362247 - - conserved hypothetical protein [Ricinus communis]
15 Hb_011512_100 0.0784603884 - - PREDICTED: uncharacterized protein LOC105650382 isoform X1 [Jatropha curcas]
16 Hb_000635_240 0.0791435299 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]
17 Hb_011316_080 0.0798565331 - - Cucumisin precursor, putative [Ricinus communis]
18 Hb_000167_150 0.0811180715 - - hypothetical protein POPTR_0008s03590g [Populus trichocarpa]
19 Hb_002245_050 0.0822262072 - - Oxygen-evolving enhancer protein 3-1, chloroplast precursor, putative [Ricinus communis]
20 Hb_002259_020 0.0850726019 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]

Gene co-expression network

sample Hb_032880_010 Hb_032880_010 Hb_031377_010 Hb_031377_010 Hb_032880_010--Hb_031377_010 Hb_001671_070 Hb_001671_070 Hb_032880_010--Hb_001671_070 Hb_000172_660 Hb_000172_660 Hb_032880_010--Hb_000172_660 Hb_002929_030 Hb_002929_030 Hb_032880_010--Hb_002929_030 Hb_001153_170 Hb_001153_170 Hb_032880_010--Hb_001153_170 Hb_004627_050 Hb_004627_050 Hb_032880_010--Hb_004627_050 Hb_000144_130 Hb_000144_130 Hb_031377_010--Hb_000144_130 Hb_031377_010--Hb_001671_070 Hb_031377_010--Hb_000172_660 Hb_002044_100 Hb_002044_100 Hb_031377_010--Hb_002044_100 Hb_007617_030 Hb_007617_030 Hb_031377_010--Hb_007617_030 Hb_000510_250 Hb_000510_250 Hb_031377_010--Hb_000510_250 Hb_001671_070--Hb_000144_130 Hb_000160_260 Hb_000160_260 Hb_001671_070--Hb_000160_260 Hb_000735_190 Hb_000735_190 Hb_001671_070--Hb_000735_190 Hb_000130_340 Hb_000130_340 Hb_001671_070--Hb_000130_340 Hb_000172_660--Hb_004627_050 Hb_002245_050 Hb_002245_050 Hb_000172_660--Hb_002245_050 Hb_007853_030 Hb_007853_030 Hb_000172_660--Hb_007853_030 Hb_000172_660--Hb_002929_030 Hb_009771_010 Hb_009771_010 Hb_002929_030--Hb_009771_010 Hb_001546_140 Hb_001546_140 Hb_002929_030--Hb_001546_140 Hb_002929_030--Hb_001153_170 Hb_000635_240 Hb_000635_240 Hb_002929_030--Hb_000635_240 Hb_002929_030--Hb_007617_030 Hb_089140_130 Hb_089140_130 Hb_002929_030--Hb_089140_130 Hb_001153_170--Hb_089140_130 Hb_001153_170--Hb_009771_010 Hb_011316_080 Hb_011316_080 Hb_001153_170--Hb_011316_080 Hb_001153_170--Hb_001546_140 Hb_006594_030 Hb_006594_030 Hb_001153_170--Hb_006594_030 Hb_001153_170--Hb_007617_030 Hb_011512_100 Hb_011512_100 Hb_004627_050--Hb_011512_100 Hb_002259_020 Hb_002259_020 Hb_004627_050--Hb_002259_020 Hb_002078_280 Hb_002078_280 Hb_004627_050--Hb_002078_280 Hb_004627_050--Hb_002245_050 Hb_004627_050--Hb_002929_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0334145 3.4128 0.698758 0.0222365 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.51954

CAGE analysis