Hb_009293_030

Information

Type -
Description -
Location Contig9293: 13060-15469
Sequence    

Annotation

kegg
ID rcu:RCOM_0534970
description Benzoate carboxyl methyltransferase, putative (EC:2.1.1.141)
nr
ID XP_012092637.1
description PREDICTED: salicylate carboxymethyltransferase [Jatropha curcas]
swissprot
ID Q9SPV4
description Salicylate carboxymethyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1
trembl
ID A0A067L7Y8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22158 PE=4 SV=1
Gene Ontology
ID GO:0030795
description salicylate o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62793: 12820-13771
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009293_030 0.0 - - PREDICTED: salicylate carboxymethyltransferase [Jatropha curcas]
2 Hb_003411_070 0.0608107419 - - PREDICTED: protein NRT1/ PTR FAMILY 3.1 [Populus euphratica]
3 Hb_031862_190 0.0619658461 - - -
4 Hb_009846_010 0.0647597508 - - PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]
5 Hb_001329_060 0.067259666 - - Polygalacturonase precursor, putative [Ricinus communis]
6 Hb_001946_070 0.0676585273 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_004223_120 0.0677294584 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
8 Hb_025048_050 0.0697711041 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
9 Hb_005357_210 0.0739559615 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
10 Hb_006649_100 0.0746311958 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
11 Hb_000735_190 0.0777336643 - - hypothetical protein POPTR_0006s19340g [Populus trichocarpa]
12 Hb_000136_120 0.0793513293 - - PREDICTED: probable strigolactone esterase D14 homolog [Jatropha curcas]
13 Hb_000167_150 0.0804217033 - - hypothetical protein POPTR_0008s03590g [Populus trichocarpa]
14 Hb_003702_010 0.081967228 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
15 Hb_002259_020 0.0830601446 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]
16 Hb_000362_080 0.0852948165 - - hypothetical protein EUTSA_v10027329mg, partial [Eutrema salsugineum]
17 Hb_000187_100 0.0876944799 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
18 Hb_000751_010 0.088514993 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000023_170 0.0893003416 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
20 Hb_102129_040 0.0921272407 - - PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009293_030 Hb_009293_030 Hb_003411_070 Hb_003411_070 Hb_009293_030--Hb_003411_070 Hb_031862_190 Hb_031862_190 Hb_009293_030--Hb_031862_190 Hb_009846_010 Hb_009846_010 Hb_009293_030--Hb_009846_010 Hb_001329_060 Hb_001329_060 Hb_009293_030--Hb_001329_060 Hb_001946_070 Hb_001946_070 Hb_009293_030--Hb_001946_070 Hb_004223_120 Hb_004223_120 Hb_009293_030--Hb_004223_120 Hb_003411_070--Hb_031862_190 Hb_003411_070--Hb_001329_060 Hb_000751_010 Hb_000751_010 Hb_003411_070--Hb_000751_010 Hb_000735_190 Hb_000735_190 Hb_003411_070--Hb_000735_190 Hb_003411_070--Hb_001946_070 Hb_031862_190--Hb_000751_010 Hb_031862_190--Hb_000735_190 Hb_031862_190--Hb_001329_060 Hb_102129_040 Hb_102129_040 Hb_031862_190--Hb_102129_040 Hb_000362_080 Hb_000362_080 Hb_009846_010--Hb_000362_080 Hb_009771_010 Hb_009771_010 Hb_009846_010--Hb_009771_010 Hb_089140_130 Hb_089140_130 Hb_009846_010--Hb_089140_130 Hb_002929_030 Hb_002929_030 Hb_009846_010--Hb_002929_030 Hb_001153_170 Hb_001153_170 Hb_009846_010--Hb_001153_170 Hb_001329_060--Hb_001946_070 Hb_025048_050 Hb_025048_050 Hb_001329_060--Hb_025048_050 Hb_000167_150 Hb_000167_150 Hb_001329_060--Hb_000167_150 Hb_001329_060--Hb_102129_040 Hb_001329_060--Hb_000751_010 Hb_001946_070--Hb_025048_050 Hb_005357_210 Hb_005357_210 Hb_001946_070--Hb_005357_210 Hb_001946_070--Hb_000167_150 Hb_000136_120 Hb_000136_120 Hb_001946_070--Hb_000136_120 Hb_006594_030 Hb_006594_030 Hb_001946_070--Hb_006594_030 Hb_000187_100 Hb_000187_100 Hb_004223_120--Hb_000187_100 Hb_030565_020 Hb_030565_020 Hb_004223_120--Hb_030565_020 Hb_002259_020 Hb_002259_020 Hb_004223_120--Hb_002259_020 Hb_006649_100 Hb_006649_100 Hb_004223_120--Hb_006649_100 Hb_001401_050 Hb_001401_050 Hb_004223_120--Hb_001401_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0187815 0.0843997 41.7435 5.34516 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.406129 12.8921

CAGE analysis