Hb_030565_020

Information

Type -
Description -
Location Contig30565: 16699-18321
Sequence    

Annotation

kegg
ID pmum:103322666
description protein ECERIFERUM 26-like
nr
ID XP_012071093.1
description PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
swissprot
ID Q9SVM9
description Protein ECERIFERUM 26 OS=Arabidopsis thaliana GN=CER26 PE=2 SV=1
trembl
ID A0A067L5G0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01091 PE=4 SV=1
Gene Ontology
ID GO:0016747
description protein eceriferum 26-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32266: 16730-18357
cDNA
(Sanger)
(ID:Location)		 022_L06.ab1: 17891-18357

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030565_020 0.0 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
2 Hb_011716_140 0.0568360962 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
3 Hb_002253_020 0.0573051307 - - PREDICTED: callose synthase 5 [Jatropha curcas]
4 Hb_011512_100 0.0612761495 - - PREDICTED: uncharacterized protein LOC105650382 isoform X1 [Jatropha curcas]
5 Hb_002259_020 0.0630163703 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]
6 Hb_004223_120 0.0699570032 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
7 Hb_002078_280 0.0722008518 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]
8 Hb_004627_050 0.0761636048 - - Chlorophyll a-b binding protein 6A [Morus notabilis]
9 Hb_001033_080 0.0821248537 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
10 Hb_001401_050 0.0857096325 - - PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Jatropha curcas]
11 Hb_006261_020 0.0903402462 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
12 Hb_000334_020 0.0913266272 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
13 Hb_005357_210 0.0935160241 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
14 Hb_002561_040 0.0951693638 - - Photosynthetic electron transfer C [Theobroma cacao]
15 Hb_000979_210 0.0956228386 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000210_210 0.0961596253 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
17 Hb_004235_070 0.0963132501 - - acyl carrier protein, putative [Ricinus communis]
18 Hb_027380_070 0.0963880937 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000084_210 0.0977244374 - - hypothetical protein POPTR_0016s08050g [Populus trichocarpa]
20 Hb_002028_070 0.0978747574 - - PREDICTED: circadian locomoter output cycles protein kaput [Jatropha curcas]

Gene co-expression network

sample Hb_030565_020 Hb_030565_020 Hb_011716_140 Hb_011716_140 Hb_030565_020--Hb_011716_140 Hb_002253_020 Hb_002253_020 Hb_030565_020--Hb_002253_020 Hb_011512_100 Hb_011512_100 Hb_030565_020--Hb_011512_100 Hb_002259_020 Hb_002259_020 Hb_030565_020--Hb_002259_020 Hb_004223_120 Hb_004223_120 Hb_030565_020--Hb_004223_120 Hb_002078_280 Hb_002078_280 Hb_030565_020--Hb_002078_280 Hb_011716_140--Hb_002078_280 Hb_011716_140--Hb_002253_020 Hb_011716_140--Hb_011512_100 Hb_004627_050 Hb_004627_050 Hb_011716_140--Hb_004627_050 Hb_011716_140--Hb_002259_020 Hb_000334_020 Hb_000334_020 Hb_002253_020--Hb_000334_020 Hb_006261_020 Hb_006261_020 Hb_002253_020--Hb_006261_020 Hb_004235_070 Hb_004235_070 Hb_002253_020--Hb_004235_070 Hb_001033_080 Hb_001033_080 Hb_002253_020--Hb_001033_080 Hb_011512_100--Hb_004627_050 Hb_011512_100--Hb_002259_020 Hb_011512_100--Hb_002078_280 Hb_000979_210 Hb_000979_210 Hb_011512_100--Hb_000979_210 Hb_002259_020--Hb_004627_050 Hb_002259_020--Hb_004223_120 Hb_002259_020--Hb_002078_280 Hb_000847_040 Hb_000847_040 Hb_002259_020--Hb_000847_040 Hb_000187_100 Hb_000187_100 Hb_004223_120--Hb_000187_100 Hb_009293_030 Hb_009293_030 Hb_004223_120--Hb_009293_030 Hb_006649_100 Hb_006649_100 Hb_004223_120--Hb_006649_100 Hb_001401_050 Hb_001401_050 Hb_004223_120--Hb_001401_050 Hb_002078_280--Hb_004627_050 Hb_001638_060 Hb_001638_060 Hb_002078_280--Hb_001638_060 Hb_002078_280--Hb_006261_020 Hb_001233_050 Hb_001233_050 Hb_002078_280--Hb_001233_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.02654 64.3155 5.13014 0 0.0136277
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0930443 0.0244002 0 0.107127 26.5509

CAGE analysis