Hb_002253_020

Information

Type -
Description -
Location Contig2253: 47367-66354
Sequence    

Annotation

kegg
ID rcu:RCOM_0627050
description transferase, transferring glycosyl groups, putative (EC:2.4.1.34)
nr
ID XP_012066577.1
description PREDICTED: callose synthase 5 [Jatropha curcas]
swissprot
ID Q3B724
description Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1
trembl
ID B9SUQ8
description Transferase, transferring glycosyl groups, putative OS=Ricinus communis GN=RCOM_0627050 PE=4 SV=1
Gene Ontology
ID GO:0000148
description callose synthase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002253_020 0.0 - - PREDICTED: callose synthase 5 [Jatropha curcas]
2 Hb_030565_020 0.0573051307 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
3 Hb_011716_140 0.0585479 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
4 Hb_000334_020 0.0610772213 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
5 Hb_006261_020 0.0612589985 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
6 Hb_004235_070 0.0647747816 - - acyl carrier protein, putative [Ricinus communis]
7 Hb_001033_080 0.0652359913 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
8 Hb_000016_140 0.0698291095 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
9 Hb_002078_280 0.0717095535 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]
10 Hb_001284_050 0.0763351355 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]
11 Hb_011512_100 0.0776401993 - - PREDICTED: uncharacterized protein LOC105650382 isoform X1 [Jatropha curcas]
12 Hb_048476_090 0.0795891835 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002006_080 0.0822380284 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Citrus sinensis]
14 Hb_001085_280 0.083193146 transcription factor TF Family: bHLH PREDICTED: transcription factor FAMA isoform X2 [Populus euphratica]
15 Hb_000740_010 0.084075349 - - cytochrome P450, putative [Ricinus communis]
16 Hb_002259_020 0.0853070092 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]
17 Hb_099335_010 0.0859752422 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
18 Hb_000188_010 0.0876233824 - - PREDICTED: cytochrome P450 94C1-like [Jatropha curcas]
19 Hb_001638_060 0.089063551 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
20 Hb_000210_210 0.0902553713 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002253_020 Hb_002253_020 Hb_030565_020 Hb_030565_020 Hb_002253_020--Hb_030565_020 Hb_011716_140 Hb_011716_140 Hb_002253_020--Hb_011716_140 Hb_000334_020 Hb_000334_020 Hb_002253_020--Hb_000334_020 Hb_006261_020 Hb_006261_020 Hb_002253_020--Hb_006261_020 Hb_004235_070 Hb_004235_070 Hb_002253_020--Hb_004235_070 Hb_001033_080 Hb_001033_080 Hb_002253_020--Hb_001033_080 Hb_030565_020--Hb_011716_140 Hb_011512_100 Hb_011512_100 Hb_030565_020--Hb_011512_100 Hb_002259_020 Hb_002259_020 Hb_030565_020--Hb_002259_020 Hb_004223_120 Hb_004223_120 Hb_030565_020--Hb_004223_120 Hb_002078_280 Hb_002078_280 Hb_030565_020--Hb_002078_280 Hb_011716_140--Hb_002078_280 Hb_011716_140--Hb_011512_100 Hb_004627_050 Hb_004627_050 Hb_011716_140--Hb_004627_050 Hb_011716_140--Hb_002259_020 Hb_000016_140 Hb_000016_140 Hb_000334_020--Hb_000016_140 Hb_000334_020--Hb_001033_080 Hb_001284_050 Hb_001284_050 Hb_000334_020--Hb_001284_050 Hb_048476_090 Hb_048476_090 Hb_000334_020--Hb_048476_090 Hb_001085_280 Hb_001085_280 Hb_000334_020--Hb_001085_280 Hb_006261_020--Hb_004235_070 Hb_000740_010 Hb_000740_010 Hb_006261_020--Hb_000740_010 Hb_001638_060 Hb_001638_060 Hb_006261_020--Hb_001638_060 Hb_006261_020--Hb_048476_090 Hb_015807_120 Hb_015807_120 Hb_006261_020--Hb_015807_120 Hb_071557_010 Hb_071557_010 Hb_006261_020--Hb_071557_010 Hb_004235_070--Hb_000740_010 Hb_004235_070--Hb_015807_120 Hb_004235_070--Hb_071557_010 Hb_004235_070--Hb_001638_060 Hb_002006_080 Hb_002006_080 Hb_004235_070--Hb_002006_080 Hb_001033_080--Hb_000016_140 Hb_002028_070 Hb_002028_070 Hb_001033_080--Hb_002028_070 Hb_009189_090 Hb_009189_090 Hb_001033_080--Hb_009189_090 Hb_005357_210 Hb_005357_210 Hb_001033_080--Hb_005357_210 Hb_001033_080--Hb_002006_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00282898 0.265472 0.0175352 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.131991

CAGE analysis