Hb_071557_010

Information

Type -
Description -
Location Contig71557: 959-1345
Sequence    

Annotation

kegg
ID tcc:TCM_042633
description UDP-glucosyltransferase family 1 protein
nr
ID XP_006379615.1
description hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
swissprot
ID U3U992
description 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus GN=UGT709C2 PE=1 SV=1
trembl
ID U5G7K2
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06270g PE=3 SV=1
Gene Ontology
ID GO:0016758
description 7-deoxyloganetic acid glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_071557_010 0.0 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
2 Hb_000740_010 0.0140777416 - - cytochrome P450, putative [Ricinus communis]
3 Hb_003392_060 0.0263320486 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
4 Hb_099335_010 0.0340781577 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
5 Hb_015807_120 0.034864338 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
6 Hb_048476_090 0.0376965916 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000011_510 0.0403395918 - - Esterase precursor, putative [Ricinus communis]
8 Hb_004235_070 0.0427633043 - - acyl carrier protein, putative [Ricinus communis]
9 Hb_011433_010 0.0481727153 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
10 Hb_006261_020 0.0512513722 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
11 Hb_014361_160 0.054011518 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
12 Hb_000414_040 0.0543945182 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
13 Hb_002006_080 0.0547613279 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Citrus sinensis]
14 Hb_171810_030 0.0549665282 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
15 Hb_005797_020 0.0567168247 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
16 Hb_096267_010 0.0588413866 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
17 Hb_001638_060 0.0593285487 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
18 Hb_004724_440 0.0635397569 - - conserved hypothetical protein [Ricinus communis]
19 Hb_040323_010 0.0666991075 - - -
20 Hb_000210_210 0.0709469973 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_071557_010 Hb_071557_010 Hb_000740_010 Hb_000740_010 Hb_071557_010--Hb_000740_010 Hb_003392_060 Hb_003392_060 Hb_071557_010--Hb_003392_060 Hb_099335_010 Hb_099335_010 Hb_071557_010--Hb_099335_010 Hb_015807_120 Hb_015807_120 Hb_071557_010--Hb_015807_120 Hb_048476_090 Hb_048476_090 Hb_071557_010--Hb_048476_090 Hb_000011_510 Hb_000011_510 Hb_071557_010--Hb_000011_510 Hb_000740_010--Hb_048476_090 Hb_000740_010--Hb_099335_010 Hb_004235_070 Hb_004235_070 Hb_000740_010--Hb_004235_070 Hb_000740_010--Hb_003392_060 Hb_000740_010--Hb_015807_120 Hb_011433_010 Hb_011433_010 Hb_003392_060--Hb_011433_010 Hb_014361_160 Hb_014361_160 Hb_003392_060--Hb_014361_160 Hb_171810_030 Hb_171810_030 Hb_003392_060--Hb_171810_030 Hb_003392_060--Hb_015807_120 Hb_099335_010--Hb_000011_510 Hb_099335_010--Hb_048476_090 Hb_096267_010 Hb_096267_010 Hb_099335_010--Hb_096267_010 Hb_099335_010--Hb_003392_060 Hb_015807_120--Hb_004235_070 Hb_015807_120--Hb_011433_010 Hb_001638_060 Hb_001638_060 Hb_015807_120--Hb_001638_060 Hb_048476_090--Hb_000011_510 Hb_001284_050 Hb_001284_050 Hb_048476_090--Hb_001284_050 Hb_006261_020 Hb_006261_020 Hb_048476_090--Hb_006261_020 Hb_000011_510--Hb_096267_010 Hb_000011_510--Hb_003392_060 Hb_000011_510--Hb_000740_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 23.0252 2.42925 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 15.9515

CAGE analysis