Hb_099335_010

Information

Type -
Description -
Location Contig99335: 1797-3289
Sequence    

Annotation

kegg
ID pop:POPTR_0010s20250g
description hypothetical protein
nr
ID XP_011036030.1
description PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
swissprot
ID Q9M052
description UDP-glycosyltransferase 76F1 OS=Arabidopsis thaliana GN=UGT76F1 PE=2 SV=1
trembl
ID U5FZC0
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s20250g PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 76f1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64806: 2011-2785 , PASA_asmbl_64807: 2817-3059
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099335_010 0.0 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
2 Hb_000011_510 0.0207967241 - - Esterase precursor, putative [Ricinus communis]
3 Hb_048476_090 0.0245508984 - - conserved hypothetical protein [Ricinus communis]
4 Hb_071557_010 0.0340781577 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
5 Hb_000740_010 0.0350309814 - - cytochrome P450, putative [Ricinus communis]
6 Hb_096267_010 0.0489164516 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
7 Hb_003392_060 0.0522786391 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
8 Hb_004235_070 0.0546015099 - - acyl carrier protein, putative [Ricinus communis]
9 Hb_006261_020 0.0566460005 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
10 Hb_015807_120 0.0582348455 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
11 Hb_001284_050 0.0610437004 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]
12 Hb_004724_440 0.0655284239 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006555_020 0.066706477 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
14 Hb_171810_030 0.0721324902 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
15 Hb_040323_010 0.0737651086 - - -
16 Hb_002006_080 0.074047038 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Citrus sinensis]
17 Hb_000334_020 0.0767331802 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
18 Hb_014361_160 0.0778400963 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
19 Hb_001638_060 0.0779841677 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
20 Hb_011433_010 0.078048631 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]

Gene co-expression network

sample Hb_099335_010 Hb_099335_010 Hb_000011_510 Hb_000011_510 Hb_099335_010--Hb_000011_510 Hb_048476_090 Hb_048476_090 Hb_099335_010--Hb_048476_090 Hb_071557_010 Hb_071557_010 Hb_099335_010--Hb_071557_010 Hb_000740_010 Hb_000740_010 Hb_099335_010--Hb_000740_010 Hb_096267_010 Hb_096267_010 Hb_099335_010--Hb_096267_010 Hb_003392_060 Hb_003392_060 Hb_099335_010--Hb_003392_060 Hb_000011_510--Hb_096267_010 Hb_000011_510--Hb_048476_090 Hb_000011_510--Hb_071557_010 Hb_000011_510--Hb_003392_060 Hb_000011_510--Hb_000740_010 Hb_048476_090--Hb_000740_010 Hb_048476_090--Hb_071557_010 Hb_001284_050 Hb_001284_050 Hb_048476_090--Hb_001284_050 Hb_006261_020 Hb_006261_020 Hb_048476_090--Hb_006261_020 Hb_071557_010--Hb_000740_010 Hb_071557_010--Hb_003392_060 Hb_015807_120 Hb_015807_120 Hb_071557_010--Hb_015807_120 Hb_004235_070 Hb_004235_070 Hb_000740_010--Hb_004235_070 Hb_000740_010--Hb_003392_060 Hb_000740_010--Hb_015807_120 Hb_006555_020 Hb_006555_020 Hb_096267_010--Hb_006555_020 Hb_004724_440 Hb_004724_440 Hb_096267_010--Hb_004724_440 Hb_096267_010--Hb_015807_120 Hb_096267_010--Hb_071557_010 Hb_011433_010 Hb_011433_010 Hb_003392_060--Hb_011433_010 Hb_014361_160 Hb_014361_160 Hb_003392_060--Hb_014361_160 Hb_171810_030 Hb_171810_030 Hb_003392_060--Hb_171810_030 Hb_003392_060--Hb_015807_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.231202 0.0167536 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.15771

CAGE analysis