Hb_003392_060

Information

Type -
Description -
Location Contig3392: 49880-50860
Sequence    

Annotation

kegg
ID rcu:RCOM_1619620
description Flavonol 4'-sulfotransferase, putative (EC:2.8.2.4)
nr
ID XP_002512030.1
description Flavonol 4'-sulfotransferase, putative [Ricinus communis]
swissprot
ID Q9M1V2
description Cytosolic sulfotransferase 5 OS=Arabidopsis thaliana GN=SOT5 PE=1 SV=1
trembl
ID B9RE91
description Sulfotransferase OS=Ricinus communis GN=RCOM_1619620 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003392_060 0.0 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
2 Hb_071557_010 0.0263320486 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
3 Hb_011433_010 0.0264612045 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
4 Hb_014361_160 0.0277866719 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
5 Hb_171810_030 0.0300253081 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
6 Hb_015807_120 0.0328179552 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
7 Hb_000740_010 0.0397580097 - - cytochrome P450, putative [Ricinus communis]
8 Hb_005797_020 0.041176437 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
9 Hb_040323_010 0.0463806101 - - -
10 Hb_000414_040 0.046748933 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
11 Hb_000011_510 0.04751582 - - Esterase precursor, putative [Ricinus communis]
12 Hb_004724_440 0.0504685079 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000053_010 0.0520934351 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
14 Hb_099335_010 0.0522786391 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
15 Hb_002434_040 0.0539123239 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
16 Hb_023313_050 0.0579399502 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
17 Hb_048476_090 0.0589760185 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004235_070 0.0595451713 - - acyl carrier protein, putative [Ricinus communis]
19 Hb_096267_010 0.0601465109 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
20 Hb_000174_120 0.0645877967 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003392_060 Hb_003392_060 Hb_071557_010 Hb_071557_010 Hb_003392_060--Hb_071557_010 Hb_011433_010 Hb_011433_010 Hb_003392_060--Hb_011433_010 Hb_014361_160 Hb_014361_160 Hb_003392_060--Hb_014361_160 Hb_171810_030 Hb_171810_030 Hb_003392_060--Hb_171810_030 Hb_015807_120 Hb_015807_120 Hb_003392_060--Hb_015807_120 Hb_000740_010 Hb_000740_010 Hb_003392_060--Hb_000740_010 Hb_071557_010--Hb_000740_010 Hb_099335_010 Hb_099335_010 Hb_071557_010--Hb_099335_010 Hb_071557_010--Hb_015807_120 Hb_048476_090 Hb_048476_090 Hb_071557_010--Hb_048476_090 Hb_000011_510 Hb_000011_510 Hb_071557_010--Hb_000011_510 Hb_005797_020 Hb_005797_020 Hb_011433_010--Hb_005797_020 Hb_011433_010--Hb_014361_160 Hb_000414_040 Hb_000414_040 Hb_011433_010--Hb_000414_040 Hb_011433_010--Hb_171810_030 Hb_000053_010 Hb_000053_010 Hb_011433_010--Hb_000053_010 Hb_014361_160--Hb_171810_030 Hb_014361_160--Hb_000053_010 Hb_002434_040 Hb_002434_040 Hb_014361_160--Hb_002434_040 Hb_023313_050 Hb_023313_050 Hb_014361_160--Hb_023313_050 Hb_040323_010 Hb_040323_010 Hb_171810_030--Hb_040323_010 Hb_171810_030--Hb_002434_040 Hb_171810_030--Hb_000053_010 Hb_171810_030--Hb_023313_050 Hb_004235_070 Hb_004235_070 Hb_015807_120--Hb_004235_070 Hb_015807_120--Hb_000740_010 Hb_015807_120--Hb_011433_010 Hb_001638_060 Hb_001638_060 Hb_015807_120--Hb_001638_060 Hb_000740_010--Hb_048476_090 Hb_000740_010--Hb_099335_010 Hb_000740_010--Hb_004235_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.53496 0.558582 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.53672

CAGE analysis