Hb_005797_020

Information

Type -
Description -
Location Contig5797: 22386-23718
Sequence    

Annotation

kegg
ID rcu:RCOM_1684010
description protein binding protein, putative
nr
ID XP_012087003.1
description PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
swissprot
ID Q0WUQ1
description BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1
trembl
ID A0A067JRQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20664 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005797_020 0.0 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
2 Hb_000414_040 0.0183832641 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
3 Hb_011433_010 0.0184058727 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
4 Hb_000174_120 0.0318297771 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
5 Hb_003836_040 0.0358149886 - - PREDICTED: cytochrome P450 77A3-like [Jatropha curcas]
6 Hb_014361_160 0.0367288417 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
7 Hb_009692_050 0.0375461851 - - -
8 Hb_003605_170 0.0388532541 - - hypothetical protein POPTR_0013s12020g [Populus trichocarpa]
9 Hb_003392_060 0.041176437 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
10 Hb_001433_210 0.0457638973 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
11 Hb_000210_020 0.0466550213 transcription factor TF Family: OFP Ovate family protein 13, putative [Theobroma cacao]
12 Hb_002284_290 0.0482788609 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
13 Hb_000053_010 0.0491160669 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
14 Hb_015807_120 0.0497379782 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
15 Hb_171810_030 0.0521207701 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
16 Hb_002434_040 0.0545308757 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
17 Hb_003598_070 0.0564499554 - - conserved hypothetical protein [Ricinus communis]
18 Hb_071557_010 0.0567168247 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
19 Hb_023313_050 0.061213903 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
20 Hb_000821_030 0.0617382591 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 [Jatropha curcas]

Gene co-expression network

sample Hb_005797_020 Hb_005797_020 Hb_000414_040 Hb_000414_040 Hb_005797_020--Hb_000414_040 Hb_011433_010 Hb_011433_010 Hb_005797_020--Hb_011433_010 Hb_000174_120 Hb_000174_120 Hb_005797_020--Hb_000174_120 Hb_003836_040 Hb_003836_040 Hb_005797_020--Hb_003836_040 Hb_014361_160 Hb_014361_160 Hb_005797_020--Hb_014361_160 Hb_009692_050 Hb_009692_050 Hb_005797_020--Hb_009692_050 Hb_000414_040--Hb_000174_120 Hb_000414_040--Hb_011433_010 Hb_001433_210 Hb_001433_210 Hb_000414_040--Hb_001433_210 Hb_000414_040--Hb_009692_050 Hb_000414_040--Hb_003836_040 Hb_011433_010--Hb_014361_160 Hb_003392_060 Hb_003392_060 Hb_011433_010--Hb_003392_060 Hb_171810_030 Hb_171810_030 Hb_011433_010--Hb_171810_030 Hb_000053_010 Hb_000053_010 Hb_011433_010--Hb_000053_010 Hb_000174_120--Hb_009692_050 Hb_000174_120--Hb_003836_040 Hb_002284_290 Hb_002284_290 Hb_000174_120--Hb_002284_290 Hb_003605_170 Hb_003605_170 Hb_000174_120--Hb_003605_170 Hb_003836_040--Hb_003605_170 Hb_003836_040--Hb_002284_290 Hb_000210_020 Hb_000210_020 Hb_003836_040--Hb_000210_020 Hb_000834_160 Hb_000834_160 Hb_003836_040--Hb_000834_160 Hb_014361_160--Hb_171810_030 Hb_014361_160--Hb_000053_010 Hb_002434_040 Hb_002434_040 Hb_014361_160--Hb_002434_040 Hb_014361_160--Hb_003392_060 Hb_023313_050 Hb_023313_050 Hb_014361_160--Hb_023313_050 Hb_147976_010 Hb_147976_010 Hb_009692_050--Hb_147976_010 Hb_003598_070 Hb_003598_070 Hb_009692_050--Hb_003598_070 Hb_009692_050--Hb_002284_290 Hb_009692_050--Hb_001433_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.70701 0.833356 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.6563

CAGE analysis