Hb_001433_210

Information

Type -
Description -
Location Contig1433: 204524-205114
Sequence    

Annotation

kegg
ID rcu:RCOM_1434200
description hypothetical protein
nr
ID XP_012088952.1
description PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
swissprot
ID Q9LZM4
description Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1
trembl
ID A0A067JHK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23259 PE=4 SV=1
Gene Ontology
ID GO:0016301
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001433_210 0.0 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
2 Hb_009692_050 0.0295168943 - - -
3 Hb_000414_040 0.0338582929 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
4 Hb_001546_140 0.0411143071 - - Auxin-binding protein ABP19a precursor, putative [Ricinus communis]
5 Hb_147976_010 0.0420075354 - - -
6 Hb_031862_210 0.0427992776 - - hypothetical protein JCGZ_24955 [Jatropha curcas]
7 Hb_000174_120 0.0429543795 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
8 Hb_005797_020 0.0457638973 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
9 Hb_000635_240 0.0461518015 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]
10 Hb_011316_080 0.0511955542 - - Cucumisin precursor, putative [Ricinus communis]
11 Hb_145502_010 0.0520095445 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
12 Hb_002245_050 0.0533750151 - - Oxygen-evolving enhancer protein 3-1, chloroplast precursor, putative [Ricinus communis]
13 Hb_009771_010 0.0539991911 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
14 Hb_002284_290 0.0540918035 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
15 Hb_003598_070 0.0550009854 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000142_050 0.056986733 - - PREDICTED: beta-glucosidase 18-like isoform X1 [Populus euphratica]
17 Hb_000887_030 0.057026414 - - serine carboxypeptidase, putative [Ricinus communis]
18 Hb_089140_130 0.0590523356 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]
19 Hb_007617_030 0.0599683328 - - hypothetical protein JCGZ_26801 [Jatropha curcas]
20 Hb_000018_110 0.061190506 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]

Gene co-expression network

sample Hb_001433_210 Hb_001433_210 Hb_009692_050 Hb_009692_050 Hb_001433_210--Hb_009692_050 Hb_000414_040 Hb_000414_040 Hb_001433_210--Hb_000414_040 Hb_001546_140 Hb_001546_140 Hb_001433_210--Hb_001546_140 Hb_147976_010 Hb_147976_010 Hb_001433_210--Hb_147976_010 Hb_031862_210 Hb_031862_210 Hb_001433_210--Hb_031862_210 Hb_000174_120 Hb_000174_120 Hb_001433_210--Hb_000174_120 Hb_009692_050--Hb_147976_010 Hb_003598_070 Hb_003598_070 Hb_009692_050--Hb_003598_070 Hb_002284_290 Hb_002284_290 Hb_009692_050--Hb_002284_290 Hb_009692_050--Hb_000174_120 Hb_009692_050--Hb_000414_040 Hb_005797_020 Hb_005797_020 Hb_000414_040--Hb_005797_020 Hb_000414_040--Hb_000174_120 Hb_011433_010 Hb_011433_010 Hb_000414_040--Hb_011433_010 Hb_003836_040 Hb_003836_040 Hb_000414_040--Hb_003836_040 Hb_009771_010 Hb_009771_010 Hb_001546_140--Hb_009771_010 Hb_007617_030 Hb_007617_030 Hb_001546_140--Hb_007617_030 Hb_001153_170 Hb_001153_170 Hb_001546_140--Hb_001153_170 Hb_089140_130 Hb_089140_130 Hb_001546_140--Hb_089140_130 Hb_011316_080 Hb_011316_080 Hb_001546_140--Hb_011316_080 Hb_147976_010--Hb_031862_210 Hb_147976_010--Hb_003598_070 Hb_145502_010 Hb_145502_010 Hb_147976_010--Hb_145502_010 Hb_147976_010--Hb_002284_290 Hb_000834_160 Hb_000834_160 Hb_147976_010--Hb_000834_160 Hb_031862_210--Hb_145502_010 Hb_031862_210--Hb_009692_050 Hb_031862_210--Hb_003598_070 Hb_031862_210--Hb_007617_030 Hb_000174_120--Hb_005797_020 Hb_000174_120--Hb_003836_040 Hb_000174_120--Hb_002284_290 Hb_003605_170 Hb_003605_170 Hb_000174_120--Hb_003605_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.243592 0.0490791 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.156691

CAGE analysis