Hb_031862_210

Information

Type -
Description -
Location Contig31862: 212951-213214
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP40956.1
description hypothetical protein JCGZ_24955 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXL6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24955 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33640: 212674-213512
cDNA
(Sanger)
(ID:Location)		 001_K07.ab1: 212736-213250 , 002_F01.ab1: 212736-213255 , 003_K15.ab1: 212695-213250 , 003_L09.ab1: 212772-213250 , 003_M06.ab1: 212820-213250 , 003_M09.ab1: 212695-213250 , 004_P18.ab1: 212736-213250 , 005_B11.ab1: 212674-213250 , 005_B23.ab1: 212738-213250 , 005_K24.ab1: 212768-213250 , 006_A14.ab1: 212736-213250 , 006_J13.ab1: 212768-213250 , 007_N15.ab1: 212736-213250 , 009_D06.ab1: 212749-213250 , 010_F11.ab1: 212840-213250 , 010_I10.ab1: 212736-213250 , 011_B10.ab1: 212738-213249 , 011_G02.ab1: 212736-213250 , 011_O09.ab1: 212723-213251 , 012_F02.ab1: 212723-213251 , 014_B19.ab1: 212738-213250 , 014_N07.ab1: 212738-213250 , 016_P11.ab1: 212736-213250 , 017_I21.ab1: 212779-213248 , 019_D15.ab1: 212736-213250 , 019_F12.ab1: 212736-213250 , 021_F03.ab1: 212736-213246 , 023_A13.ab1: 212747-213250 , 024_J20.ab1: 212736-213250 , 025_N24.ab1: 212736-213250 , 026_C02.ab1: 212749-213250 , 027_M12.ab1: 212829-213263 , 028_B14.ab1: 212740-213250 , 028_F13.ab1: 212736-213250 , 028_I11.ab1: 212736-213251 , 031_B22.ab1: 212736-213250 , 031_H08.ab1: 212738-213250 , 034_G17.ab1: 212753-213250 , 034_L08.ab1: 212747-213263 , 034_N22.ab1: 212747-213250 , 034_O13.ab1: 212747-213250 , 038_I22.ab1: 212736-213255 , 039_P02.ab1: 212749-213250 , 041_M15.ab1: 212891-213250 , 043_D14.ab1: 212745-213246 , 045_H16.ab1: 212723-213251 , 048_B23.ab1: 212747-213250 , 048_O05.ab1: 212736-213250

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031862_210 0.0 - - hypothetical protein JCGZ_24955 [Jatropha curcas]
2 Hb_147976_010 0.0222602306 - - -
3 Hb_145502_010 0.0247666452 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
4 Hb_009692_050 0.0408510796 - - -
5 Hb_001433_210 0.0427992776 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
6 Hb_003598_070 0.0452725053 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007617_030 0.0463079587 - - hypothetical protein JCGZ_26801 [Jatropha curcas]
8 Hb_001546_140 0.0465831669 - - Auxin-binding protein ABP19a precursor, putative [Ricinus communis]
9 Hb_000018_110 0.0522435068 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]
10 Hb_001253_050 0.0532579481 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
11 Hb_002284_290 0.0545686137 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
12 Hb_000887_030 0.0559052307 - - serine carboxypeptidase, putative [Ricinus communis]
13 Hb_000142_050 0.0580922455 - - PREDICTED: beta-glucosidase 18-like isoform X1 [Populus euphratica]
14 Hb_000160_020 0.0592449035 - - PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Jatropha curcas]
15 Hb_001205_140 0.0595416635 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
16 Hb_000834_160 0.0620769922 - - hypothetical protein JCGZ_07239 [Jatropha curcas]
17 Hb_000174_120 0.0626505784 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
18 Hb_002973_100 0.0634009013 transcription factor TF Family: GNAT PREDICTED: probable N-acetyltransferase HLS1 [Populus euphratica]
19 Hb_009771_010 0.0662020444 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
20 Hb_000635_240 0.066406704 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]

Gene co-expression network

sample Hb_031862_210 Hb_031862_210 Hb_147976_010 Hb_147976_010 Hb_031862_210--Hb_147976_010 Hb_145502_010 Hb_145502_010 Hb_031862_210--Hb_145502_010 Hb_009692_050 Hb_009692_050 Hb_031862_210--Hb_009692_050 Hb_001433_210 Hb_001433_210 Hb_031862_210--Hb_001433_210 Hb_003598_070 Hb_003598_070 Hb_031862_210--Hb_003598_070 Hb_007617_030 Hb_007617_030 Hb_031862_210--Hb_007617_030 Hb_147976_010--Hb_003598_070 Hb_147976_010--Hb_009692_050 Hb_147976_010--Hb_145502_010 Hb_002284_290 Hb_002284_290 Hb_147976_010--Hb_002284_290 Hb_000834_160 Hb_000834_160 Hb_147976_010--Hb_000834_160 Hb_000018_110 Hb_000018_110 Hb_145502_010--Hb_000018_110 Hb_145502_010--Hb_003598_070 Hb_145502_010--Hb_009692_050 Hb_001205_140 Hb_001205_140 Hb_145502_010--Hb_001205_140 Hb_009692_050--Hb_003598_070 Hb_009692_050--Hb_002284_290 Hb_009692_050--Hb_001433_210 Hb_000174_120 Hb_000174_120 Hb_009692_050--Hb_000174_120 Hb_000414_040 Hb_000414_040 Hb_009692_050--Hb_000414_040 Hb_001433_210--Hb_000414_040 Hb_001546_140 Hb_001546_140 Hb_001433_210--Hb_001546_140 Hb_001433_210--Hb_147976_010 Hb_001433_210--Hb_000174_120 Hb_003598_070--Hb_000834_160 Hb_003598_070--Hb_002284_290 Hb_003836_040 Hb_003836_040 Hb_003598_070--Hb_003836_040 Hb_007617_030--Hb_001546_140 Hb_009771_010 Hb_009771_010 Hb_007617_030--Hb_009771_010 Hb_001153_170 Hb_001153_170 Hb_007617_030--Hb_001153_170 Hb_000887_030 Hb_000887_030 Hb_007617_030--Hb_000887_030 Hb_089140_130 Hb_089140_130 Hb_007617_030--Hb_089140_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.66396 8573.9 2347.66 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 5608.89

CAGE analysis