Hb_147976_010

Information

Type -
Description -
Location Contig147976: 1187-2105
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147976_010 0.0 - - -
2 Hb_031862_210 0.0222602306 - - hypothetical protein JCGZ_24955 [Jatropha curcas]
3 Hb_003598_070 0.0236982328 - - conserved hypothetical protein [Ricinus communis]
4 Hb_009692_050 0.0253263324 - - -
5 Hb_145502_010 0.0262413433 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
6 Hb_002284_290 0.0368708283 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
7 Hb_000834_160 0.0411547252 - - hypothetical protein JCGZ_07239 [Jatropha curcas]
8 Hb_001433_210 0.0420075354 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
9 Hb_000018_110 0.0469954932 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]
10 Hb_000174_120 0.0515421107 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_001205_140 0.0537462545 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
12 Hb_003836_040 0.0552963007 - - PREDICTED: cytochrome P450 77A3-like [Jatropha curcas]
13 Hb_000142_050 0.0577631251 - - PREDICTED: beta-glucosidase 18-like isoform X1 [Populus euphratica]
14 Hb_000414_040 0.0604028437 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
15 Hb_001546_140 0.0622036114 - - Auxin-binding protein ABP19a precursor, putative [Ricinus communis]
16 Hb_005797_020 0.0627409823 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
17 Hb_001253_050 0.0646450084 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
18 Hb_013394_070 0.0658242857 - - hypothetical protein POPTR_0013s12090g [Populus trichocarpa]
19 Hb_007617_030 0.0670910406 - - hypothetical protein JCGZ_26801 [Jatropha curcas]
20 Hb_004464_040 0.067423998 - - hypothetical protein JCGZ_01308 [Jatropha curcas]

Gene co-expression network

sample Hb_147976_010 Hb_147976_010 Hb_031862_210 Hb_031862_210 Hb_147976_010--Hb_031862_210 Hb_003598_070 Hb_003598_070 Hb_147976_010--Hb_003598_070 Hb_009692_050 Hb_009692_050 Hb_147976_010--Hb_009692_050 Hb_145502_010 Hb_145502_010 Hb_147976_010--Hb_145502_010 Hb_002284_290 Hb_002284_290 Hb_147976_010--Hb_002284_290 Hb_000834_160 Hb_000834_160 Hb_147976_010--Hb_000834_160 Hb_031862_210--Hb_145502_010 Hb_031862_210--Hb_009692_050 Hb_001433_210 Hb_001433_210 Hb_031862_210--Hb_001433_210 Hb_031862_210--Hb_003598_070 Hb_007617_030 Hb_007617_030 Hb_031862_210--Hb_007617_030 Hb_003598_070--Hb_000834_160 Hb_003598_070--Hb_002284_290 Hb_003598_070--Hb_009692_050 Hb_003836_040 Hb_003836_040 Hb_003598_070--Hb_003836_040 Hb_003598_070--Hb_145502_010 Hb_009692_050--Hb_002284_290 Hb_009692_050--Hb_001433_210 Hb_000174_120 Hb_000174_120 Hb_009692_050--Hb_000174_120 Hb_000414_040 Hb_000414_040 Hb_009692_050--Hb_000414_040 Hb_000018_110 Hb_000018_110 Hb_145502_010--Hb_000018_110 Hb_145502_010--Hb_009692_050 Hb_001205_140 Hb_001205_140 Hb_145502_010--Hb_001205_140 Hb_002284_290--Hb_003836_040 Hb_002284_290--Hb_000834_160 Hb_003605_170 Hb_003605_170 Hb_002284_290--Hb_003605_170 Hb_000834_160--Hb_003836_040 Hb_004464_040 Hb_004464_040 Hb_000834_160--Hb_004464_040 Hb_000834_160--Hb_009692_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.09882 0.842727 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.2461

CAGE analysis