Hb_040323_010

Information

Type -
Description -
Location Contig40323: 64-1100
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_040323_010 0.0 - - -
2 Hb_171810_030 0.0222902829 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
3 Hb_004724_440 0.0327602389 - - conserved hypothetical protein [Ricinus communis]
4 Hb_099182_010 0.0347803417 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
5 Hb_014361_160 0.0382366135 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
6 Hb_023313_050 0.0389325162 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
7 Hb_000191_090 0.0407544651 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
8 Hb_002434_040 0.0410963993 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
9 Hb_000053_010 0.0448848539 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
10 Hb_003392_060 0.0463806101 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
11 Hb_008484_080 0.0514388174 - - PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
12 Hb_000011_510 0.0560004976 - - Esterase precursor, putative [Ricinus communis]
13 Hb_011433_010 0.0560839197 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
14 Hb_000977_250 0.0561006235 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
15 Hb_096267_010 0.0611147579 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
16 Hb_015807_120 0.0666851362 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
17 Hb_071557_010 0.0666991075 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
18 Hb_099335_010 0.0737651086 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
19 Hb_005797_020 0.0742739335 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
20 Hb_005618_030 0.0747852368 - - PREDICTED: cytochrome P450 734A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_040323_010 Hb_040323_010 Hb_171810_030 Hb_171810_030 Hb_040323_010--Hb_171810_030 Hb_004724_440 Hb_004724_440 Hb_040323_010--Hb_004724_440 Hb_099182_010 Hb_099182_010 Hb_040323_010--Hb_099182_010 Hb_014361_160 Hb_014361_160 Hb_040323_010--Hb_014361_160 Hb_023313_050 Hb_023313_050 Hb_040323_010--Hb_023313_050 Hb_000191_090 Hb_000191_090 Hb_040323_010--Hb_000191_090 Hb_171810_030--Hb_014361_160 Hb_002434_040 Hb_002434_040 Hb_171810_030--Hb_002434_040 Hb_003392_060 Hb_003392_060 Hb_171810_030--Hb_003392_060 Hb_000053_010 Hb_000053_010 Hb_171810_030--Hb_000053_010 Hb_171810_030--Hb_023313_050 Hb_004724_440--Hb_171810_030 Hb_096267_010 Hb_096267_010 Hb_004724_440--Hb_096267_010 Hb_004724_440--Hb_000191_090 Hb_000011_510 Hb_000011_510 Hb_004724_440--Hb_000011_510 Hb_004724_440--Hb_003392_060 Hb_099182_010--Hb_000191_090 Hb_008484_080 Hb_008484_080 Hb_099182_010--Hb_008484_080 Hb_099182_010--Hb_023313_050 Hb_099182_010--Hb_002434_040 Hb_099182_010--Hb_171810_030 Hb_011433_010 Hb_011433_010 Hb_014361_160--Hb_011433_010 Hb_014361_160--Hb_000053_010 Hb_014361_160--Hb_002434_040 Hb_014361_160--Hb_003392_060 Hb_014361_160--Hb_023313_050 Hb_023313_050--Hb_002434_040 Hb_023313_050--Hb_000053_010 Hb_000977_250 Hb_000977_250 Hb_023313_050--Hb_000977_250 Hb_000191_090--Hb_008484_080 Hb_000191_090--Hb_171810_030 Hb_000191_090--Hb_023313_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 41.5451 4.60775 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 39.7325

CAGE analysis