Hb_099182_010

Information

Type -
Description -
Location Contig99182: 1380-2797
Sequence    

Annotation

kegg
ID csv:101214783
description uncharacterized LOC101214783
nr
ID XP_011652548.1
description PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
swissprot
ID -
description -
trembl
ID A0A0A0LDX8
description Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889130 PE=4 SV=1
Gene Ontology
ID GO:0016020
description PREDICTED: uncharacterized protein LOC101214783

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099182_010 0.0 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
2 Hb_000191_090 0.0319452845 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
3 Hb_008484_080 0.0339987137 - - PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
4 Hb_040323_010 0.0347803417 - - -
5 Hb_023313_050 0.0381502178 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
6 Hb_002434_040 0.0445224786 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
7 Hb_171810_030 0.0485357602 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
8 Hb_000053_010 0.0505127757 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
9 Hb_000977_250 0.0544418481 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
10 Hb_004724_440 0.0568774549 - - conserved hypothetical protein [Ricinus communis]
11 Hb_014361_160 0.0599665302 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
12 Hb_000482_170 0.0607319623 transcription factor TF Family: C2C2-GATA GATA nirate-inducible carbon-metabolism involved protein [Populus nigra x Populus x canadensis]
13 Hb_003050_380 0.065577811 - - hypothetical protein POPTR_0007s03380g [Populus trichocarpa]
14 Hb_001170_020 0.0676389121 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007101_120 0.0741864798 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
16 Hb_000003_490 0.0742745077 - - PREDICTED: uncharacterized protein LOC105631559 isoform X2 [Jatropha curcas]
17 Hb_000985_150 0.0748735532 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
18 Hb_003392_060 0.0778742416 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
19 Hb_011433_010 0.0791003593 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
20 Hb_000625_080 0.0809657885 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_099182_010 Hb_099182_010 Hb_000191_090 Hb_000191_090 Hb_099182_010--Hb_000191_090 Hb_008484_080 Hb_008484_080 Hb_099182_010--Hb_008484_080 Hb_040323_010 Hb_040323_010 Hb_099182_010--Hb_040323_010 Hb_023313_050 Hb_023313_050 Hb_099182_010--Hb_023313_050 Hb_002434_040 Hb_002434_040 Hb_099182_010--Hb_002434_040 Hb_171810_030 Hb_171810_030 Hb_099182_010--Hb_171810_030 Hb_000191_090--Hb_040323_010 Hb_004724_440 Hb_004724_440 Hb_000191_090--Hb_004724_440 Hb_000191_090--Hb_008484_080 Hb_000191_090--Hb_171810_030 Hb_000191_090--Hb_023313_050 Hb_008484_080--Hb_023313_050 Hb_008484_080--Hb_040323_010 Hb_008484_080--Hb_002434_040 Hb_000977_250 Hb_000977_250 Hb_008484_080--Hb_000977_250 Hb_040323_010--Hb_171810_030 Hb_040323_010--Hb_004724_440 Hb_014361_160 Hb_014361_160 Hb_040323_010--Hb_014361_160 Hb_040323_010--Hb_023313_050 Hb_023313_050--Hb_002434_040 Hb_000053_010 Hb_000053_010 Hb_023313_050--Hb_000053_010 Hb_023313_050--Hb_000977_250 Hb_023313_050--Hb_171810_030 Hb_023313_050--Hb_014361_160 Hb_002434_040--Hb_000053_010 Hb_002434_040--Hb_000977_250 Hb_002434_040--Hb_014361_160 Hb_002434_040--Hb_171810_030 Hb_002434_040--Hb_040323_010 Hb_171810_030--Hb_014361_160 Hb_003392_060 Hb_003392_060 Hb_171810_030--Hb_003392_060 Hb_171810_030--Hb_000053_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.812524 0.102403 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.918686

CAGE analysis