Hb_008484_080

Information

Type -
Description -
Location Contig8484: 107753-109153
Sequence    

Annotation

kegg
ID vvi:100260080
description crocetin glucosyltransferase, chloroplastic-like
nr
ID XP_012078445.1
description PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
swissprot
ID F8WKW0
description Crocetin glucosyltransferase, chloroplastic OS=Gardenia jasminoides GN=UGT75L6 PE=1 SV=1
trembl
ID A0A067K8X9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13132 PE=3 SV=1
Gene Ontology
ID GO:0016758
description crocetin chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008484_080 0.0 - - PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
2 Hb_099182_010 0.0339987137 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
3 Hb_023313_050 0.0484779293 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein rcd1-like [Jatropha curcas]
4 Hb_000191_090 0.0494115808 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
5 Hb_040323_010 0.0514388174 - - -
6 Hb_002434_040 0.0535321924 - - hypothetical protein CICLE_v10022672mg [Citrus clementina]
7 Hb_000977_250 0.0583162134 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
8 Hb_000053_010 0.058368426 - - hypothetical protein PRUPE_ppa017696mg [Prunus persica]
9 Hb_171810_030 0.0602861251 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
10 Hb_000985_150 0.0615433268 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
11 Hb_004724_440 0.0663931501 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003050_380 0.0674421083 - - hypothetical protein POPTR_0007s03380g [Populus trichocarpa]
13 Hb_014361_160 0.0687517769 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
14 Hb_000482_170 0.068880428 transcription factor TF Family: C2C2-GATA GATA nirate-inducible carbon-metabolism involved protein [Populus nigra x Populus x canadensis]
15 Hb_007101_120 0.0696424321 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
16 Hb_001170_020 0.0698971313 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000625_080 0.0765064195 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
18 Hb_020805_050 0.0771833893 - - PREDICTED: MLO-like protein 9 [Jatropha curcas]
19 Hb_001710_010 0.0782224607 - - Uncharacterized protein TCM_001832 [Theobroma cacao]
20 Hb_005754_050 0.0823634994 - - PREDICTED: uncharacterized protein LOC105636679 [Jatropha curcas]

Gene co-expression network

sample Hb_008484_080 Hb_008484_080 Hb_099182_010 Hb_099182_010 Hb_008484_080--Hb_099182_010 Hb_023313_050 Hb_023313_050 Hb_008484_080--Hb_023313_050 Hb_000191_090 Hb_000191_090 Hb_008484_080--Hb_000191_090 Hb_040323_010 Hb_040323_010 Hb_008484_080--Hb_040323_010 Hb_002434_040 Hb_002434_040 Hb_008484_080--Hb_002434_040 Hb_000977_250 Hb_000977_250 Hb_008484_080--Hb_000977_250 Hb_099182_010--Hb_000191_090 Hb_099182_010--Hb_040323_010 Hb_099182_010--Hb_023313_050 Hb_099182_010--Hb_002434_040 Hb_171810_030 Hb_171810_030 Hb_099182_010--Hb_171810_030 Hb_023313_050--Hb_002434_040 Hb_000053_010 Hb_000053_010 Hb_023313_050--Hb_000053_010 Hb_023313_050--Hb_000977_250 Hb_023313_050--Hb_171810_030 Hb_014361_160 Hb_014361_160 Hb_023313_050--Hb_014361_160 Hb_000191_090--Hb_040323_010 Hb_004724_440 Hb_004724_440 Hb_000191_090--Hb_004724_440 Hb_000191_090--Hb_171810_030 Hb_000191_090--Hb_023313_050 Hb_040323_010--Hb_171810_030 Hb_040323_010--Hb_004724_440 Hb_040323_010--Hb_014361_160 Hb_040323_010--Hb_023313_050 Hb_002434_040--Hb_000053_010 Hb_002434_040--Hb_000977_250 Hb_002434_040--Hb_014361_160 Hb_002434_040--Hb_171810_030 Hb_002434_040--Hb_040323_010 Hb_000977_250--Hb_000053_010 Hb_001170_020 Hb_001170_020 Hb_000977_250--Hb_001170_020 Hb_003605_170 Hb_003605_170 Hb_000977_250--Hb_003605_170 Hb_000977_250--Hb_014361_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 25.7646 3.48611 0 0.0150399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.067594 0.026588 0 0.0212466 29.6144

CAGE analysis